Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lutzomyia_20longipalpis_20[genbank_20GCA_5F000265325.1_202012-06-11] 11,532 sequences; 154,229,266 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq825 131 2e-25 seq1176 109 6e-19 seq24 102 8e-17 seq79 82.4 8e-11 >seq825 Length=38805 Score = 131 bits (144), Expect = 2e-25 Identities = 162/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || |||| ||| | || || ||||| ||||| || |||||||||||| | |||| | Sbjct 11879 AGACGCAGCACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGC 11938 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || ||||| || || ||||| || | |||||||||||| || || || || ||| Sbjct 11939 CCATCCTCTAGCTGCTTCCCGGCAAAGATGAGACGCTGCTGATCCGGAGGGATTCCCTCT 11998 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || |||||||| ||||| || | ||| || || | ||| || || || || Sbjct 11999 TTATCCTGAATTTTCGCCTTGACATTTTCAATTGTATCCGAGGGTTCGACCTCAAGGGTG 12058 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 ||||| || || || | |||||| |||||||| ||||||||| Sbjct 12059 ATGGTCTTCCCCGTGAGAGTTTTCACGAAAATCTGCATTTTG 12100 >seq1176 Length=25388 Score = 109 bits (120), Expect = 6e-19 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||| ||||| || || |||||||| || |||||||||||| | || | Sbjct 17275 AGACGGAGCACAAGGTGGAGTGTTGATTCCTTCTGGATGTTGTAGTCGGACAATGTACGC 17334 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || ||||| || || || || || | |||||||||||| ||||| ||||||||| Sbjct 17335 CCATCTTCCAGCTGCTTCCCGGCGAAGATGAGACGCTGCTGATCTGGCGGAATGCCTTCT 17394 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || |||||||| ||| || || | || || |||| || || ||||| || Sbjct 17395 TTGTCCTGAATTTTAGCTTTTACATTCTCGATGGTATCTGACGGCTCAACCTCGAGGGTG 17454 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || || | ||||| || || || ||||| Sbjct 17455 ATCGTCTTCCCTGTGAGTGTTTTCACAAAGATCTGCAT 17492 >seq24 Length=280856 Score = 102 bits (112), Expect = 8e-17 Identities = 150/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 ||||| || || || |||||||| ||||| ||||| ||| | || | || ||| Sbjct 39555 ACGAGATG-AG-GTAGATTCCTTCTGAATATTGTAATCGGAGAGCGTACGCCCATCCTCG 39498 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 || || ||||| ||||| |||||||||||||| || || || ||||| || || || || Sbjct 39497 AGTTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGG 39438 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || ||| || || || | || || || | || || || ||||| ||||| ||| Sbjct 39437 ATCTTTGCCTTCACATTCTCAATCGTATCAGATGGCTCGACCTCAAGAGTGATGGTCTTA 39378 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 || |||||||| || || || || |||||| Sbjct 39377 CCCGTTAAAGTCTTCACAAAGATCTGCATT 39348 >seq79 Length=216850 Score = 82.4 bits (90), Expect = 8e-11 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 21543 ACGATCCGCCACGAATTCAATGTATTGACACATGCTGTCGCAATTCATGCCCAACAGATC 21602 |||||| ||||||||||||||||| || ||||| | |||||||||||||| || || Sbjct 76028 ACGATCTGCCACGAATTCAATGTACTGCGACATGAGTTGGCAATTCATGCCCAGCATGTC 76087 Query 21603 GACCGGTAGCGCTTCGGTGAAAAACTCCTTCTCGATAGCCACCGCTTC 21650 || || || || || |||| || |||| ||| || | ||| ||||| Sbjct 76088 AACAGGAAGGGCATCTGTGAGGAATTCCTGCTCAATGGTCACAGCTTC 76135 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505325546820640