Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lutzomyia_20longipalpis_20[genbank_20GCA_5F000265325.1_202012-06-11] 11,532 sequences; 154,229,266 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq2439 488 8e-133 seq79 210 3e-49 >seq2439 Length=24097 Score = 488 bits (540), Expect = 8e-133 Identities = 1229/1850 (66%), Gaps = 36/1850 (2%) Strand=Plus/Minus Query 68365 TTATCCAATGTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATACCG 68424 ||||||| ||||| || |||| || || ||||| || || | ||| ||||| || Sbjct 3993 TTATCCACAGTAAATTGGATGGCATTGGCAGCTGGTTTAGTGCGCAAATAATACATCCCC 3934 Query 68425 GTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGA 68484 ||||| || || | |||| | | |||||| || || ||||| ||| | || Sbjct 3933 GTTTTGAGGCCCATTTTCCAGGCATGGAAATGAATTGAAGTGAGTTTCCCATAGTTAGGT 3874 Query 68485 TCGGCTATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCC 68544 || || | | ||| || | |||||||||||||| ||||| || || | || || ||| Sbjct 3873 TCTGCCACGTAAATGTTGAATGATTGACTTTGATCAATGAAGGCCCCACGGTCAGCTGCC 3814 Query 68545 ATTTTTATAATACTCTTTTGAGGA--ATTTCCCAAATAGTCTTAAAAATCTGTTTGATAT 68602 |||| || || | |||| | |||||||| | || ||| | | || |||| Sbjct 3813 ATTTCAATCAT--TGTTTTCACCTTGATTTCCCACACGGTTTTATACAACTCACGAATAT 3756 Query 68603 CATCTGGAAGGCTCG---TATTTTGAATGGATCCACCATCGGATATAATTATATTCTTGA 68659 | || |||| | |||| || | || ||| | || || | | | ||||| | Sbjct 3755 CCTCAGGAATTTCCAGAATATTCTGCACAGAGCCATTGTTGGCAATTAATTTGTTCTTCA 3696 Query 68660 TCTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTAACTATTT 68719 | ||||||||||| | | || | | | | | | ||||| ||||| | || Sbjct 3695 TTTCATCATTCCAAAGGCGTAGTTCAGAGAGATCCTTTAACAGATGGCTGTTAACCACTT 3636 Query 68720 GAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATT 68779 | ||||||||||| | || | ||| ||||| ||||| || || ||||| | |||| Sbjct 3635 GGAATTCCCCAGAAAGAACACGACGGGTGTACATATTGGATGTGTAGGGTTCGAAGGATT 3576 Query 68780 CATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTAT 68839 ||||||| || ||||||||||| || || || |||||||| || ||||| | | || Sbjct 3575 CATTATTGCCAAGAATTTGAGCCGTAGAAGCCGTTGGCATTGGAGCCACAAGCAGGGAAT 3516 Query 68840 TTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAAAGATCAGATG 68899 ||| || |||||| || || | || | | | ||||| ||||||||| | || Sbjct 3515 TTCGAACACCATGCTGAGCAATCTTTGCCTTCAATTCATCCCAATTCCAAAGATCCGTTG 3456 Query 68900 GTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATCCATTATATG 68959 | |||||| | |||||| || |||||||| || ||| | |||||| || | Sbjct 3455 GCTTTCTATTCCACATATCGTACTGCAGAATTCCCTTGCTTACTGGACTTCCATTGTACG 3396 Query 68960 TTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCGTAATAAA 69019 | ||||| ||||| || ||||| || |||||||| ||||| | || || || |||| Sbjct 3395 TCTCATATGGTCCGAGCTTCTCAGCGAGCTCACAACTAGCCTCAAGAGCTCCATAGTAAA 3336 Query 69020 TTGTTTCGAAAATCTTCTTATTGAG-ATCTTGTGCTTCTAGACTATCGAATGGATAATGT 69078 | ||||| || || | | ||||| ||||| |||||| ||||| |||| | Sbjct 3335 TGGTTTCAAAGATTTGTTGGTTGAGTTTCTTG-GCTTCTTTGCTATCATATGGGAGGCGC 3277 Query 69079 AAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCTCTTA 69138 | ||||| | ||||| || | || ||||| ||||| || || ||||| |||| | || Sbjct 3276 ATGAGAATGTAAGCATCCGCTAGACCTTGAACTCCAATTCCAATCGGTCTGTGTCGCATA 3217 Query 69139 TTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTAAGATTT 69198 || || | | ||||| || | || || || || || ||||||| ||| || ||||| Sbjct 3216 TTGGAGCGCTTTGCTTCGGGTACGGGGTAGTAGTTGATGTCTATAACTTTGTTGAGATTG 3157 Query 69199 CGGACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATCGTC-CATC---TAT 69254 || || | || ||| |||||| || ||||||| | |||| ||| | Sbjct 3156 CGTGTGACAATCTTCGTGACGGACTTTAGCTTCTCAAAATCATA-CGTCTTATCGGGCAG 3098 Query 69255 AACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGCTACCTCAT--TAGAATTT 69312 ||||||||||| ||||| | ||||||| ||| || || || | ||||| | | | Sbjct 3097 TACAAACATATTAAGTGCAATTGATGCTAAATTGCACACAGCAATCTCATCCTTGGA--C 3040 Query 69313 GCATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGCTGA 69372 | ||||| | ||||| || || || || ||||| || || || | ||| |||||| Sbjct 3039 GAATATTCAACGATCTCGGTGCAGAGGTTGCTACAGCGAATTGTACCAATATTCTGCTGA 2980 Query 69373 TTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGA 69432 |||||||| |||||| ||||||||||| || ||| |||| || || ||||| | ||| Sbjct 2979 TTACTCTTACGGTTACATGCGTCCTTGTACAGCATATACGGCGTTCCCGTTTCTACTTGA 2920 Query 69433 GATTCGATAATAGATTTCCAAACGACCCTAGCATTTA--TTACGGTCTTGTAACGCTTCT 69490 || || || | ||||| | | ||| || ||||| |||| | | Sbjct 2919 CTTTGAATGATGGCAAACCAAAGATCTCGAGCTGGTACCTTACG--AATGTACTGACCTT 2862 Query 69491 CTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAG 69550 || ||| || | ||| || | | ||||| || ||||| |||| |||||||| Sbjct 2861 CTGCTTCGTACTTTGTGTACAATTTATTAAATTCTTCACCCCAGCAATCAAACAATCCAG 2802 Query 69551 GACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATA 69610 | || | || || ||||| | ||| || |||| || || || | |||||||| Sbjct 2801 GGCACTTGTTAGGGCACATGAGACTCCATTCACCATCCTCGGAGACACGCTGCATAAATA 2742 Query 69611 GATCGGGAATCCAAAGAGCTATA-AAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTA 69669 ||| |||||||| || || ||| |||||||||| | || | ||| || || ||| Sbjct 2741 AATCAGGAATCCAGAGCGC-ATAGAAGAGATCTCGTGCTCGTGCCTTTTCCTTACCGGTA 2683 Query 69670 ttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCC 69729 || |||||||| || || || || | ||||| |||||| ||||| || ||||| || Sbjct 2682 TTCTTTTTAAGGTCTAGGAATTCAAAGATATCCCCATGCCAGGGTTCAAGGTATATTGCA 2623 Query 69730 ATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACT 69789 | | | || || || ||||| || || ||||| | ||| | |||||| | || ||||| Sbjct 2622 AAGGCACCTGGGCGCTTATTCCCACCTTGATCAACGTAGCAGGCAGTAGTGTTGTAGACG 2563 Query 69790 CTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTT 69849 | |||||||| | | ||||| ||| | ||||| ||||||| ||| | ||| || | Sbjct 2562 CGAAGCATCGGTACGAGTCCATTCGATGTGCCATTGGTTCCAGCAATGTGACTACCACGA 2503 Query 69850 GCGCGAAT---ATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCA 69906 || ||||| | | || || | ||| || |||||||| || ||||||||||| Sbjct 2502 GCTCGAATGCAGTGAGTATTA---ACACCAATCCCTCCTGCAGACTTTGAGATTAGAGCG 2446 Query 69907 CAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAA 69966 || |||||| ||| || || ||||| || || || ||||| |||| || || ||| Sbjct 2445 CATTGTTTCAGTGTATCGTAGATACCATCAATACTGTCATCAGCCATGGACAGGAGGAAA 2386 Query 69967 CAGCTAGACATTTGATGATG---TATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGA 70023 || |||| | | ||| | | ||| | || ||| | ||| || |||||||| Sbjct 2385 CA---AGACGATAGCTGAGGCACTGGAGTGGCAGCTGCAAAGAGTGTTGGTGATGCGTGC 2329 Query 70024 GTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATCCCACTGA 70083 ||||| | || || || || ||||| || ||||| |||| | || || | Sbjct 2328 GTGAAATACCGTTGTGATAGAAGGTTGTACGTCTCAATGGCTGCAGCAATGTCATTCCCG 2269 Query 70084 TGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTT 70143 |||||||| | | || ||||||| ||||||||| || | ||| | |||| Sbjct 2268 TGAATTCCCACAGATACTCGCATCAGCATATGCTGGGGCCTTTCAGCGATTTTCCCGCCG 2209 Query 70144 ATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTA 70193 || |||| | |||||| | || || || || || ||||||||| |||| Sbjct 2208 ATCTTCATTAAATATGATCTCTCGAGTGTCTTGAAGCCAAAATAGCTGTA 2159 >seq79 Length=216850 Score = 210 bits (232), Expect = 3e-49 Identities = 411/604 (68%), Gaps = 9/604 (1%) Strand=Plus/Plus Query 39602 TGTTTAAACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCG 39661 || || ||||||| || || |||||||| || ||||||||||| | ||| | || Sbjct 76182 TGCTTGAACATTAGACACGCAAAGTCACAGTGGAGGCCCTCATCGCGTGAAATGAGCTCA 76241 Query 39662 TTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAA 39721 || || |||||||| ||||| | || || |||||||| || || | || || Sbjct 76242 TTGCTGAACGTGAGTCCGGGCATGATGCCGCGTGACTTGAGCCAGAAGATTGAGGCGAAG 76301 Query 39722 GATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTT 39781 || ||||| || || || ||||| ||||| |||| | || || ||| || || Sbjct 76302 CTACCGCTGAAGAAAATCCCCTCAACTGCCGCAAAGGCAATGACCCTTTCGCCGAAATTT 76361 Query 39782 GTATCATTA-TGT--ATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATT 39838 | || | || ||||||| |||||||||| || |||||||| ||||| |||| Sbjct 76362 GCTTCCTGGCTGGCAATCCACTGGAGTGCCCAATCGGCCTTCTTCTTCACACACGGCAGC 76421 Query 39839 GTTTCTATAGCATTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATT 39898 || || || ||||| ||||| | | || || | ||| | || ||||| || Sbjct 76422 GTCTCGATGGCATTGAAGAGGAAGTCCTTCTCCTGCGGATCCCGTATGTACGTATCAATG 76481 Query 39899 AACAGACTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACAT 39958 | || ||| |||||||| ||| | || || || || ||||| || || || || || Sbjct 76482 AGCAAACTGTACATTTCGCTATGTACATTCTCCATGGCAATCTGGAAGCCATAGAAGAAT 76541 Query 39959 CTTGCTTCAGTAATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATT 40018 | ||| || || ||||| ||||| || || | ||| | | ||| ||||| || || Sbjct 76542 CGTGCCTCTGTGATTTGCACCTCCTGACTGAAGCGCTCCACGAGATTCTCATTTACAATC 76601 Query 40019 CCATCACTAGCGGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTC---ATCGGGT 40075 ||||| || ||||| ||||||| || || |||| || | |||| ||| Sbjct 76602 CCATCGGATGCCGCAAAGAATGCCAGGACGTGGCTAATGAATTTCCTTTCGCAATCCT-- 76659 Query 40076 GTCAATTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAAC 40135 |||| |||||||| || ||||| |||| |||||||| ||| |||||||||| Sbjct 76660 -TCAAAGCATTCCAGTGATCCATATCCCGGGATAGGTCTACTTCCTCAACTGTCCAAAAT 76718 Query 40136 GACGCCTCTGCCTTTTTGTACATGTTCCATATATCACGATATTGTATTGGAAAAATAACA 40195 || ||||| |||||||||||||| | ||| | ||| | ||||| || || || | |||| Sbjct 76719 GAGGCCTCGGCCTTTTTGTACATCTCCCACACATCGTGGTATTGAATGGGGAAGACAACA 76778 Query 40196 AATC 40199 |||| Sbjct 76779 AATC 76782 Score = 93.3 bits (102), Expect = 6e-14 Identities = 90/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 40084 ATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTC 40143 |||||||| || ||||| |||| |||||||| ||| |||||||||| || ||||| Sbjct 78676 ATTCCAGTGATCCATATCCCGGGATAGGTCTACTTCCTCAACTGTCCAAAATGAGGCCTC 78735 Query 40144 TGCCTTTTTGTACATGTTCCATATATCACGATATTGTATTGGAAAAATAACAAATC 40199 |||||||||||||| | ||| | ||| | ||||| || || || | |||||||| Sbjct 78736 GGCCTTTTTGTACATCTCCCACACATCGTGGTATTGAATGGGGAAGACAACAAATC 78791 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686809782096480