Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lutzomyia_20longipalpis_20[genbank_20GCA_5F000265325.1_202012-06-11] 11,532 sequences; 154,229,266 total letters Query= NC_027916.2 Length=160358 Score E Sequences producing significant alignments: (Bits) Value seq1371 89.7 5e-13 >seq1371 Length=16595 Score = 89.7 bits (98), Expect = 5e-13 Identities = 182/268 (68%), Gaps = 2/268 (1%) Strand=Plus/Plus Query 31140 TTGCTCTCGGAGACCTTCGATGTGATTGACATAAATATGCGCATCGCCAATAGAGTGTAC 31199 |||||| ||||| ||| | |||||| | || | ||| ||||| || | | ||| || Sbjct 8626 TTGCTCCCGGAGGGGTTCTACGTGATTCAAGTAGACATGAGCATCACCGAGGGTGTGCAC 8685 Query 31200 CAATTCCCCTGGTCTTAGATGGGTCAATTTGGCAATCACATGAACCAAAAGCGCATAACT 31259 || || ||||| | |||| || | || |||||||| | | || ||||| || Sbjct 8686 GAAGTCTCCTGGCTTGAGATCTGTGATTTGGGCAATCATTCGTGTGAGGAGAGCATAGCT 8745 Query 31260 CGCTATGTTGAATGGTACACCCAATCCCAAATCGGCAGATCGTTGATATAACAAACAGGA 31319 || |||||||||||||| |||| ||||| ||||| || |||||||| | || || Sbjct 8746 GGCAATGTTGAATGGTACCCCCAGTCCCATGTCGGCTGAACGTTGATACATTTGGCACGA 8805 Query 31320 AAGTTCATCTCCGGTCACGTAAAATTGAAATAACACA-TGACAAGGCGGCAAAGCCATTT 31378 || || | || |||||| ||||| | || || ||||| || || | |||||| Sbjct 8806 GAGCTCTCCATTGGCCACGTAGAATTG-TACAAGGCAGTGACAGGGTGGGAGCGCCATTA 8864 Query 31379 CACAGGTATCGACGGGATTCCAAGCGCT 31406 | ||| || |||||||| || || Sbjct 8865 TGGGGAGATCCACAGGATTCCATGCACT 8892 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 512943648512960