Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lutzomyia_20longipalpis_20[genbank_20GCA_5F000265325.1_202012-06-11] 11,532 sequences; 154,229,266 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq2439 279 4e-70 seq825 104 2e-17 seq1176 89.7 4e-13 >seq2439 Length=24097 Score = 279 bits (308), Expect = 4e-70 Identities = 1038/1612 (64%), Gaps = 49/1612 (3%) Strand=Plus/Minus Query 130406 TTTTCGACGGTGAATTGAATGGCATTGGTGGCCGGCTTGGTGCGCAAATAATACATGCCT 130465 || || || || ||||| |||||||||| || || || ||||||||||||||||| || Sbjct 3993 TTATCCACAGTAAATTGGATGGCATTGGCAGCTGGTTTAGTGCGCAAATAATACATCCCC 3934 Query 130466 GTTTTGAGTCCAATTTTGTGTCCATAATTGTGGATGCTGCACATTGTTTGG--TAATTGG 130523 |||||||| || ||||| ||| || || || | |||| || || | Sbjct 3933 GTTTTGAGGCCCATTTTCCAGGCATGGAAATGAAT--TGAAGTGAGTTTCCCATAGTTAG 3876 Query 130524 GTTGCGCCACGAATATGTTGAGCGATTGCGATTGATCAATAAAAGCGCCCCTGTCTGCAG 130583 ||| |||||| | ||||||| ||||| ||||||||| || || || | ||| || | Sbjct 3875 GTTCTGCCACGTAAATGTTGAATGATTGACTTTGATCAATGAAGGCCCCACGGTCAGCTG 3816 Query 130584 CCATGTCGAGCATGGTTTTATTTTTCATCTCCCAAGCGGTCTTGTATAGATCCCTAATGT 130643 |||| || | ||| ||||| || || ||||| |||| || || | || | ||| | Sbjct 3815 CCATTTCAATCATTGTTTTCACCTTGATTTCCCACACGGTTTTATACAACTCACGAATAT 3756 Query 130644 GTTTGGGTATGCGCGCAATCGATTGAACGCTACCGTTGTTGGCTATAATTTCGTTGCGCA 130703 | || || | ||| || || || |||||||| || | || ||| || Sbjct 3755 CCTCAGGAATTTCCAGAATATTCTGCACAGAGCCATTGTTGGCAATTAATTTGTTCTTCA 3696 Query 130704 TACTTTTATCGTACAATCCAAGCTGTA---CA---AGATCTTTTACCAAATGATTATTAA 130757 | || ||| | | | ||| ||| || ||||| |||| || ||| | |||| Sbjct 3695 T---TTCATCATTCCA---AAGGCGTAGTTCAGAGAGATCCTTTAACAGATGGCTGTTAA 3642 Query 130758 TGATTTGAAAATCACCAGCCAGGACGCGTCTAACGTAAATGTTGCTCGTGAACGGTTCAA 130817 | ||| || || |||| || || || | ||| || ||| ||| | ||||| | Sbjct 3641 CCACTTGGAATTCCCCAGAAAGAACACGACGGGTGTACATATTGGATGTGTAGGGTTCGA 3582 Query 130818 AGGATTCGTTGTTGCCGAATATTTGTGCTGTAGTTGCGGTGGGCATGTATGCCACTAATA 130877 ||||||| || ||||| | ||||| || |||| || || ||||| ||||| | | Sbjct 3581 AGGATTCATTATTGCCAAGAATTTGAGCCGTAGAAGCCGTTGGCATTGGAGCCACAAGCA 3522 Query 130878 GAGAATTACGAAGACCGTGCGTCGTGATTTTTCGCTTCAATTCATCCCAATCCCATAGAG 130937 | ||||| |||| ||| ||| | || ||| ||||||||||||||||| ||| ||| Sbjct 3521 GGGAATTTCGAACACCATGCTGAGCAATCTTTGCCTTCAATTCATCCCAATTCCAAAGAT 3462 Query 130938 AGGTAGGTTTGACATTGTTCCACATATCAAATTGTAGTATGCCTTTACTGGCGGGACTGG 130997 || || || ||| ||||||||| | || || || || || || | ||||| Sbjct 3461 CCGTTGGCTTTCTATT---CCACATATCGTACTGCAGAATTCCCTTGCTTACTGGACTTC 3405 Query 130998 ATTCGAACGATTCGTAGATTCCTT-CGACACGAGCCAGGTCGTTGCTAGCTTCCAAAGCT 131056 | | ||| || || ||| | | | ||| || || ||||| || | |||| Sbjct 3404 CATTGTACGTCTCATATGGTCCGAGCTTCTC-AGCGAGCTCACAACTAGCCTCAAGAGCT 3346 Query 131057 CCGTAATAAATGGTTTCGGCAATTTGTTTATTTAATTGTTTCGCTTGGTTGCTCTCGTAA 131116 || || ||||||||||| ||||||| || | || || |||| ||||| || || Sbjct 3345 CCATAGTAAATGGTTTCAAAGATTTGTTGGTTGAGTTTCTTGGCTTCTTTGCTATCATAT 3286 Query 131117 GGAAATTTCATTAAAATAAAAGCGTCTGCGAGACCCTGTATCCCAACGCCCACCGGTCTA 131176 || | ||| | ||| |||| || || ||||| || | |||| || | |||||| Sbjct 3285 GGGAGGCGCATGAGAATGTAAGCATCCGCTAGACCTTGAACTCCAATTCCAATCGGTCTG 3226 Query 131177 TGTTTTAAATTACATTTACGCGAACATTCGGT---GGGATAAAGGTTAATGTCAATTATT 131233 ||| | ||| | ||| ||||| ||| || ||| ||||| || | | Sbjct 3225 TGTCGCATATTGGAG---CGCTTTGCTTCGGGTACGGGGTAGTAGTTGATGTCTATAACT 3169 Query 131234 TTGTTTAAATTGCGCACTACAATTTGTGTGACGCTTTTCAATTTGTCGAAATCAAACGTG 131293 ||||| | |||||| ||||| | |||||| || | || || |||||| |||| Sbjct 3168 TTGTTGAGATTGCGTGTGACAATCTTCGTGACGGACTTTAGCTTCTCAAAATCATACGTC 3109 Query 131294 CCAGTTTCGAGGTTTACAAATTGATTTACACATATTGACGCCAGATTACAAACTGCCGTT 131353 | ||| | |||||| ||| | ||||| || | ||| || || || | Sbjct 3108 TTA---TCGGGCAGTACAAACATATTAAGTGCAATTGATGCTAAATTGCACACAGCAATC 3052 Query 131354 TCGTCATAATCGCAATACTGAACAATTTCGGCGCACAAATTACTGCTCTTTATGGTGCCC 131413 || || | |||| | ||| || |||| ||| | || || | || || || Sbjct 3051 TCATCCTTGGACGAATATTCAACGATCTCGGTGCAGAGGTTGCTACAGCGAATTGTACCA 2992 Query 131414 AAATTTTGTTGATTGCTTTTAGCATTCACATG-GTCCTTGTACATCATGTAGGGCGTGCC 131472 | ||| || ||||| || ||| || ||||| ||||||||||| ||| || ||||| || Sbjct 2991 ATATTCTGCTGATTACTCTTACGGTT-ACATGCGTCCTTGTACAGCATATACGGCGTTCC 2933 Query 131473 CGTTTCGACTTGAGTTTCAATAATGT--ATCGAAAGAGTTTTCGAGCAGACAATTGATAT 131530 |||||| |||||| ||| ||| ||| | | ||||| | |||||| | | | | Sbjct 2932 CGTTTCTACTTGACTTTGAATGATGGCAAACCAAAGA--TCTCGAGCTGGTACCTTACGA 2875 Query 131531 TTGTATTGGCCGCGTTTTTCGTAATTTTCGTACAACGTTTCAAAGTTTTGGCC-----AA 131585 |||| || || | |||||| ||| |||||| | | ||| | || || || Sbjct 2874 ATGTACTGACCTTCTGCTTCGTACTTTGTGTACAATTTATTAAATTCTTCACCCCAGCAA 2815 Query 131586 ACGAACTGTCCAAATTGGGACATTCGCTGGGACACATTAGCGACCACACGCCGTTCTGTT 131645 | ||| |||| || || | | | || ||||| || ||| | || | || Sbjct 2814 TCAAACAATCCA-----GGGCACTTGTTAGGGCACATGAGACTCCATTCACCATCCTCGG 2760 Query 131646 CAACTCGCTTCATAAACAAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTTT 131705 || |||| |||||| ||||| || | ||| | ||| || || ||||||| ||| | Sbjct 2759 AGACACGCTGCATAAATAAATCAGGAATCCAGAGCGCATAGAAGAGATCTCGTGCTCGTG 2700 Query 131706 TCTCTTCTGTACCCATAAtttttttCAAATTTAAAAAGTCCAAAATGTCCGCATGCCAGG 131765 || ||| |||| || | ||||| | | || || || || || ||| ||||||||| Sbjct 2699 CCTTTTCCTTACCGGTATTCTTTTTAAGGTCTAGGAATTCAAAGATATCCCCATGCCAGG 2640 Query 131766 GTTCCAAATACACTGCCATTGCGCCTTTGCGCTTA---CCGCCTTGATTAACATGACGAA 131822 |||| | || | ||| | || ||| ||||||| || ||||||| ||| | | Sbjct 2639 GTTCAAGGTATATTGCAAAGGCACCTGGGCGCTTATTCCCACCTTGATCAACGTAGCAGG 2580 Query 131823 CCATGTTGTTGTATACGCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCT 131882 | | ||||||| ||||| | ||| || | | || || | | |||||||| | Sbjct 2579 CAGTAGTGTTGTAGACGCGAAGCATCGGTACGAGTCCATTCGATGTGCCATTGGTTCCAG 2520 Query 131883 TAATGTAGCTGCCATTGGCTCTGATTTTGTGAACGTTGAGTCCAATACCTCCGCCGTATT 131942 ||||| || ||| |||| || |||| || | ||||| ||||| | | | Sbjct 2519 CAATGTGACTACCACGAGCTCGAATGCAGTGAGTATTAACACCAATCCCTCCTGCAGACT 2460 Query 131943 TAGAGATTAGTGCGCATTTGGTTAGAGTGTTATAGATACCTTCCACGCTGTC 131994 | |||||||| ||||||| | || || | |||||||| || | ||||| Sbjct 2459 TTGAGATTAGAGCGCATTGTTTCAGTGTATCGTAGATACCATCAATACTGTC 2408 >seq825 Length=38805 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 |||| |||||||| | || || || || || || ||||||||| | | ||||| | Sbjct 11882 CGCAGCACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGCCCA 11941 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 || || ||||| || ||||| | ||||||||||| |||||||| || | ||||||||| Sbjct 11942 TCCTCTAGCTGCTTCCCGGCAAAGATGAGACGCTGCTGATCCGGAGGGATTCCCTCTTTA 12001 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || || || || | |||| | || || | || ||| || || || || || Sbjct 12002 TCCTGAATTTTCGCCTTGACATTTTCAATTGTATCCGAGGGTTCGACCTCAAGGGTGATG 12061 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | || ||||| ||||||||||| || || ||||| Sbjct 12062 GTCTTCCCCGTGAGAGTTTTCACGAAAATCTGCAT 12096 >seq1176 Length=25388 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || || || ||||||||| || | ||| | ||||| ||||| || ||| Sbjct 17296 GTTGATTCCTTCTGGATGTTGTAGTCGGACAATGTACGCCCATCTTCCAGCTGCTTCCCG 17355 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | ||||||||||| ||||| ||||| | || ||||| || || || ||| Sbjct 17356 GCGAAGATGAGACGCTGCTGATCTGGCGGAATGCCTTCTTTGTCCTGAATTTTAGCTTTT 17415 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | || | || |||| | ||||| || || || || | || || || || ||| Sbjct 17416 ACATTCTCGATGGTATCTGACGGCTCAACCTCGAGGGTGATCGTCTTCCCTGTGAGTGTT 17475 Query 27231 TTCACAAAGATTTGCAT 27247 ||||||||||| ||||| Sbjct 17476 TTCACAAAGATCTGCAT 17492 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424874677063584