Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lutzomyia_20longipalpis_20[genbank_20GCA_5F000265325.1_202012-06-11] 11,532 sequences; 154,229,266 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq2439 197 2e-45 seq2 114 2e-20 >seq2439 Length=24097 Score = 197 bits (218), Expect = 2e-45 Identities = 902/1401 (64%), Gaps = 36/1401 (3%) Strand=Plus/Minus Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766 ||| || || | |||||| ||||| ||| |||||||||| || | ||||| || || || Sbjct 3607 GTACATATTGGATGTGTAGGGTTCGAAGGATTCATTATTGCCAAGAATTTGAGCCGTAGA 3548 Query 110767 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTC 110826 || ||||||||||| |||| | || || |||| ||| | || || | | Sbjct 3547 AGCCGTTGGCATTGGAGCCACAAGCAGGGAATTTCGAACACCATGCTGAGCAATCTTTGC 3488 Query 110827 CTTGAGAACATCCCAGT--CGTAGTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTGA 110884 ||| | ||||||| | | || | | | | |||| | |||||| || |||| Sbjct 3487 CTTCAATTCATCCCAATTCCAAAGATCCGTTGGCTTTCTATT--CCACATATCGTACTGC 3430 Query 110885 AGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTC--AG 110942 || | || | | | ||| || | | || ||||| | || | ||||| || Sbjct 3429 AGAATTCCCTTGCTTACTGGACTTCCATTGTACGTCTCATATGGTCC--GAGCTTCTCAG 3372 Query 110943 CCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCA 111002 | | ||||| || ||||| || | | | | || |||||||||||||| | || | Sbjct 3371 CGAGCTCACAACTAGCCTCAAGAGCTCCATAGTAAATGGTTTCAAAGATTTGTTGGTTGA 3312 Query 111003 TCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGAC 111062 | ||||||||| | |||| ||| | ||| | ||| | ||||||| |||| Sbjct 3311 GTTTCTTGGCTTCTTTGCTATCATATGGGAGGCGCATGAGAATGTAAGCATCCGCTAGAC 3252 Query 111063 CTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGA---CTTTCGCGCAGTCTCAA 111119 ||||||| || | ||||| ||||||||||||||||| || |||| || | | | Sbjct 3251 CTTGAACTCCAATTCCAATCGGTCTGTGTCGCATATTGGAGCGCTTT-GCTTCGGGT--A 3195 Query 111120 CGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTT 111179 |||| || | || |||| || ||| ||| ||||| || |||||||| |||| Sbjct 3194 CGGGGTAGTAGTTGATGTCTATAACTTTGTTGAGATTGCGTGTGACAATCTTCGTGACGG 3135 Query 111180 CATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGA 111239 | || || ||| ||||| | || | || || | ||| || | ||| || | Sbjct 3134 ACTTTAGCTTCTCAAAATCATACGTCTTA-TCGGG-CAGT-ACAAACATATTAAGTGCAA 3078 Query 111240 TTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTAC 111299 ||||||| |||||||| ||||| |||||||||| | || || | || || || | Sbjct 3077 TTGATGCTAAATTGCACACAGCAATCTCATCCTTGGACGAATATTCAACGATCTCGGTGC 3018 Query 111300 ATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCAT 111359 | | |||| || ||| || || | ||||| || |||||||| ||| || || | Sbjct 3017 AGAGGTTGCTACAGCGAATTGTACCAATATTCTGCTGATTACTCTTACGGTTACATGCGT 2958 Query 111360 CCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGA-TTTGAGA-ATAGCCTTCCA 111417 ||||||| ||||| || ||||| ||||| || || ||| ||||| || || ||| Sbjct 2957 CCTTGTACAGCATATACGGCGTTCCCGTTTCTA-CT-TGACTTTGAATGATGGCAAACCA 2900 Query 111418 AACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAG 111477 || ||| |||||||| | || | | || || || |||||||||||||| | Sbjct 2899 AAGATCTCGAGCTGGTACCTTACGAATGTACTGACCTTCTGCTTCGTACTTTGTGTACAA 2840 Query 111478 GGCTTCAAACTCCTCACCCACCGCG-TCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAA 111536 | ||| || |||||| | || || | | || || ||||| || || | | Sbjct 2839 TTTATTAAATTCTTCACCC-CAGCAATCAAACAATCCAGGGCACTTGTTAGGGCACATGA 2781 Query 111537 GAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATG 111596 || ||||| |||| | || || |||| ||| || | || |||||||| || | Sbjct 2780 GACTCCATTCACCATCCTCGGAGACACGCTGCATAAATAAATCAGGAATCCAGAGCGCAT 2721 Query 111597 AAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGT-TGAGTCGTAAC-TCAAGGAA 111654 | |||||||||| || |||| ||| | ||| ||| | | ||| || ||||| Sbjct 2720 AGAAGAGATCTCGTGCTCGTGCCTTTTCCTTACC--GGTATTCTTTTTAAGGTCTAGGAA 2663 Query 111655 CTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCG---ACG 111711 || | ||||||| | ||||| || ||||| || | ||| | | || || | Sbjct 2662 TTCAAAGATATCCCCATGCCAGGGTTCAAGGTATATTGCAAAGGCACCTGGGCGCTTATT 2603 Query 111712 CCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACC 111771 |||| |||||| || |||| || || | ||| | ||||||||||| || | | || Sbjct 2602 CCCACCTTGATCAACGTAGCAGGCAGTAGTGTTGTAGACGCGAAGCATCGGTACGAGTCC 2543 Query 111772 ATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACAT-CA-TGGATG 111829 || ||| ||||| || || ||| | || | | ||| || || || | Sbjct 2542 ATTCGATGTGCCATTGGTTCCAGCAAT--GTGACTACCACGAGCTCGAATGCAGTGAGTA 2485 Query 111830 TGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAG 111889 | | ||||| || || || ||||||||||| | || || | | || || | ||| Sbjct 2484 TTAACACCAATCCCTCCTGCAGACTTTGAGATTAGAGCGCATTGTTTCAGTGTATCGTAG 2425 Query 111890 ATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTT 111949 ||||| | || ||| || ||| | ||||| ||| || | ||| || | Sbjct 2424 ATACCATCAATACTGTCATCAGCCATGGACAGGAGGAAACAAGACGATAGCTGAGGCACT 2365 Query 111950 GGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACC-TTGGGACATCTT 112008 || || |||| ||||| ||||||| |||||| |||| ||||| ||| || | Sbjct 2364 GGAGTGGCAGCTGCAAAGAGTGTTGGTGATGCGTGCGTGAA-ATACCGTTGTGATAGAAG 2306 Query 112009 GTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCAT 112068 || ||| ||||| | | | | | ||||||| | |||||| || || | | || ||||| Sbjct 2305 GTTGTACGTCTCAATGGCTGCAGCAATGTCATTCCCGTGAATTCCCACAGATACTCGCAT 2246 Query 112069 GAACATGTACTGTGGGGTTTC 112089 | ||| | ||| || |||| Sbjct 2245 CAGCATATGCTGGGGCCTTTC 2225 >seq2 Length=704064 Score = 114 bits (126), Expect = 2e-20 Identities = 341/517 (66%), Gaps = 28/517 (5%) Strand=Plus/Plus Query 11444 ATCTTGCGATCAAAACGACCCGGGCGAAGGAGGGCGTCATCAAGGATATCCACGCGATTA 11503 |||| | |||||| || ||||| || || ||||| | ||| ||||||||||||||||| Sbjct 341627 ATCTGCCTATCAAAGCGTCCCGGACGCAGCAGGGCCTTATCGAGGATATCCACGCGATTC 341686 Query 11504 GTGGCCGCAATAACCACAA---TGCCAGTCTCATTGTCAAAGCCATCCATCTCGGTGAGT 11560 || ||||| | ||| || | | ||| |||| |||||||||||||| || Sbjct 341687 GTTGCCGCCAAAACGACGACATTTGTGGTCGTATTG---AAGCCATCCATCTCAACAAGC 341743 Query 11561 AATTGATTAATTGTTTGTTCTCTCTCATCATTTGCTGGCATACCACC--AGCACTGCG-- 11616 | ||||| | || | |||| | | || || ||||| ||| || | Sbjct 341744 AGCTGATTGAGCGTAT------TCTCCTGCTCTGAATGC---CCACCGAAGCTCTTCCCA 341794 Query 11617 --TTGCTTGC---CCACCGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCG 11671 | ||||| |||| || || || || |||||||| | |||||| || || || Sbjct 341795 CCTCTCTTGCGCCCCACAGCGTCGATTTCGTCAATGAAAAGAATACACGGAGCATGTTTC 341854 Query 11672 CGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACA 11731 ||||| || | || | ||| || |||||| | || || ||||||||||| || | | Sbjct 341855 CGGGCCATGGCGAACATATCTCGCACCCTTGACGGCCCTACGCCAACAAACATTTCGAGA 341914 Query 11732 AAGTTTGCGGCAGAGCACTG-GATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGC 11790 || | | | || ||||| ||| || || ||||| | ||||| || | || ||| Sbjct 341915 AATTCCGATCCGGA-CACTGTGATAAAGGGCACATTCGCCTCACCGGCTGTTGCCTTGGC 341973 Query 11791 GAGGAGGGTCTTTCCCGTACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGC 11850 ||||| ||||| |||||||| || ||||| || | || ||| ||| ||||| || Sbjct 341974 CAGGAGAGTCTTCCCCGTACCCGGTGGACCCGTTAGCATTGCCCCTTTGGGAATCTTCGC 342033 Query 11851 ACCACTTCCAAAATATCTCTCGGGTTGCTTGAGAAAATCCACAATCTCTTCAAGTTC-AT 11909 || ||| || || || | |||||| |||| ||||| || || ||| || Sbjct 342034 CCCCAAATCAATGTACTGCTGCGGATTCTTGAGGAAATTCACAAATTCCATAATTTCAAT 342093 Query 11910 CTTTGGCCGCGTCAATCCCCTCAACATCACTGAAGCG 11946 |||| ||| | ||| || | ||||| ||||||| Sbjct 342094 CTTT-GCCTCCTCACATCCAGCCACATCCTTGAAGCG 342129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627941469187200