Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lutzomyia_20longipalpis_20[genbank_20GCA_5F000265325.1_202012-06-11] 11,532 sequences; 154,229,266 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq2439 257 2e-63 seq79 127 2e-24 >seq2439 Length=24097 Score = 257 bits (284), Expect = 2e-63 Identities = 1111/1739 (64%), Gaps = 36/1739 (2%) Strand=Plus/Plus Query 104216 GAAACCCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGAT 104275 |||| || ||| | ||| | ||||| || | | || ||||| ||| | ||||||| | Sbjct 2225 GAAAGGCCCCAGCATATGCTGATGCGAGTATCTGTGGGAATTCACGGGAATGACATTGCT 2284 Query 104276 TCTGTCTTGGAGACATACGACAAGATGTCCCAA-GGTATGTTCATTCACGCAACACCAAC 104334 | | | | ||||| ||| || | || ||| ||||| |||| |||||| ||||||| Sbjct 2285 GCAGCCATTGAGACGTACAACCTTCTATCACAACGGTAT-TTCACGCACGCATCACCAAC 2343 Query 104335 CCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAA 104394 ||||| |||| || ||| || || | || ||| ||||| | ||| Sbjct 2344 ACTCTTTGCAGCTGCCACTCCAGTGCCTCAGCTATCGTCTTGTTTCCTCCTGTCCATGGC 2403 Query 104395 GGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTG 104454 || ||| || | |||||||| | || || | | || || | ||||||||||| Sbjct 2404 TGATGACAGTATTGATGGTATCTACGATACACTGAAACAATGCGCTCTAATCTCAAAGTC 2463 Query 104455 GGCTGGGGGTATTGGGATGCACATCCA-TG-ATGTGAGAGCCAATAAATCTCGTATTCGG 104512 || || || ||||| | | | || || || ||| | | || | ||| Sbjct 2464 TGCAGGAGGGATTGGTGTTAATACTCACTGCATTCGAGCTCGTGGTAGTCAC--ATTGCT 2521 Query 104513 GGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 104572 || || ||||| ||| |||| | | || ||||||||||| | ||| | || || Sbjct 2522 GGAACCAATGGCACATCGAATGGACTCGTACCGATGCTTCGCGTCTACAACACTACTGCC 2581 Query 104573 CGCTATGTAAATCAAGCTGGGCGT---CGAAAGGGATCTATCGCAGTCTATCTTGAGCCA 104629 |||| || |||||| |||| | || || | | ||| | || ||||| || Sbjct 2582 TGCTACGTTGATCAAGGTGGGAATAAGCGCCCAGGTGCCTTTGCAATATACCTTGAACCC 2641 Query 104630 TGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAA----GGTGACGAGGA 104685 ||||| | ||||||| | || ||||| || | | || || ||| | || | Sbjct 2642 TGGCATGGGGATATCTTTGAATTCCTAGA----CCTTAAAAAGAATACCGGTAAGGAAAA 2697 Query 104686 GGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGT 104745 ||| || || |||||||||| || ||||||||||| ||| | || ||| || | || Sbjct 2698 GGCACGAGCACGAGATCTCTTCTATGCGCTCTGGATTCCTGATTTATTTATGCAGCGTGT 2757 Query 104746 TGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGC 104805 ||| ||| | ||| |||| | || || ||||| ||||| | | ||| Sbjct 2758 CTCCGAGGATGGTGAATGGAGTCTCATGTGCCCTAACAAGTGCCCTGGATTGTTTGATTG 2817 Query 104806 CGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGC 104865 | |||||| || ||| | | |||||||||||||| | |||||||| | | | Sbjct 2818 CTGGGGTGAAGAATTTAATAAATTGTACACAAAGTACGAAGCAGAAGGTCAGTACATTCG 2877 Query 104866 GACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTAC 104925 | ||| |||||| ||| | ||| || || | | |||| || || || || Sbjct 2878 TAAGGTACCAGCTCGAGATCTTTGGTTTGCCATCATTCAAAGTCAAGTAGAAACGGGAAC 2937 Query 104926 ACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGT 104985 || || ||||| ||||| ||||| ||||||| ||||||||||| ||||| | ||| Sbjct 2938 GCCGTATATGCTGTACAAGGACGCATGTAACCGTAAGAGTAATCAGCAGAATATTGGTAC 2997 Query 104986 GATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGC 105045 || || ||| ||||| || || ||| | |||| | | ||| ||||||| || Sbjct 2998 AATTCGCTGTAGCAACCTCTGCACCGAGATCGTTGAATATTCGTCCAAGGATGAGATTGC 3057 Query 105046 TGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATT 105105 |||||| || | |||||||| || || | || ||| || || ||||| | Sbjct 3058 TGTGTGCAATTTAGCATCAATTGCACTTAATATGTTTGTACTGCCCGA---TAAGACGTA 3114 Query 105106 TGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTAT 105165 ||||| ||| || || | || ||||| | |||||| || || |||| |||||| Sbjct 3115 TGATTTTGAGAAGCTAAAGTCCGTCACGAAGATTGTCACACGCAATCTCAACAAAGTTAT 3174 Query 105166 TGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAA----TCTAATATGAGACACCGTC 105221 || | || | |||||||| || | ||| || |||||| ||||| | | Sbjct 3175 AGACATCAACTACTACCCCGT----ACCCGAAGCAAAGCGCTCCAATATGCGACACAGAC 3230 Query 105222 CAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTG 105281 | ||||| | || ||||| ||||| ||||||| | |||||| |||| | ||| || Sbjct 3231 CGATTGGAATTGGAGTTCAAGGTCTAGCGGATGCTTACATTCTCATGCGCCTCCCATATG 3290 Query 105282 ATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTC 105341 || | | ||||| ||| || |||| | || ||||| ||||| || | | |||| Sbjct 3291 ATAGCAAAGAAGCCAAGAAACTCAACCAACAAATCTTTGAAACCATTTACTATGGAGCTC 3350 Query 105342 TTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTC 105401 ||||||| |||| ||| | || ||| || |||||||| || | | || || Sbjct 3351 TTGAGGCTAGTTGTGAGCTCGCTGAGAAGCTCGGACCATATGAGACGTACAATGGAAGTC 3410 Query 105402 CAGCTTCACAAGGG-GTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTAC 105460 ||| | |||||| | || || | ||||||||| | | || | | | || | Sbjct 3411 CAG-TAAGCAAGGGAATTCTGCAGTACGATATGTGGAATAGAAAGCCAACGGATCTTTGG 3469 Query 105461 GACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATG 105520 | ||||| | | |||| | || || | ||| |||| || || || || Sbjct 3470 AATTGGGATGAATTGAAGGCAAAGATTGCTCAGCATGGTGTTCGAAATTCCCTGCTTGTG 3529 Query 105521 GCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCC 105580 |||||||||||||| || || || || ||||| | || |||||||||| ||| |||||| Sbjct 3530 GCTCCAATGCCAACGGCTTCTACGGCTCAAATTCTTGGCAATAATGAATCCTTCGAACCC 3589 Query 105581 TACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAG 105640 ||||| | || || || | | || | || || || | || |||| Sbjct 3590 TACACATCCAATATGTACACCCGTCGTGTTCTTTCTGGGGAATTCCAAGTGGTTAACAGC 3649 Query 105641 CATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCAT- 105699 ||||| | | || ||| || | | || ||| | || ||||| || | || Sbjct 3650 CATCTGTTAAAGGATCTCTCTGAACTACGCCTTTGGAATGATGAAATGAA-GAACAAATT 3708 Query 105700 -GGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTAAGAAGT 105758 || | | ||| || | || |||||| |||| ||||| | || ||| ||| Sbjct 3709 AATTGCCAAC-AATGGCTCTGTGCAGAATATTCTGGAAATTCCTGAGGATATTCGTGAGT 3767 Query 105759 TGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAGATCGTG 105818 |||| || || |||||||||||| |||| | ||||| ||||| || || |||| Sbjct 3768 TGTATAAAACCGTGTGGGAAATCAAGGTGAAAACAATGATTGAAATGGCAGCTGACCGTG 3827 Query 105819 GTCGCTTCATTGATCAAAGTCAAAGTATGAATCTCTTCATGG-AAAGTCCAACGATGTCC 105877 | ||||||||||||||||||| | || | | | ||| | | | ||| ||| Sbjct 3828 GGGCCTTCATTGATCAAAGTCAATCATTCAACATTTACGTGGCAGAACCTAACTATG-GG 3886 Query 105878 AAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTA 105936 || ||| |||| || || | | ||||| | ||| |||||||||||||||||||| Sbjct 3887 AAACTCACTTCAATTCATTTCCATGCCTGGAAAATGGGCCTCAAAACGGGGATGTATTA 3945 >seq79 Length=216850 Score = 127 bits (140), Expect = 2e-24 Identities = 343/520 (66%), Gaps = 6/520 (1%) Strand=Plus/Minus Query 94440 TTGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGACTCTAAATGA 94499 |||||| | ||| || ||||| || || |||| |||| | ||||| || | || || Sbjct 76715 TTGGACAGTTGAGGAAGTAGACCTATCCCGGGATATGGATCACTGGAATGCTTTGAAGGA 76656 Query 94500 AAATGAAAAGAAATTCATAAAATACATCCTGGCATTCTTTGCTGGATCCGATGGAATTGT 94559 |||| ||||||||| | || |||||||||||||||| | ||||||||| ||||| Sbjct 76655 TTGCGAAAGGAAATTCATTAGCCACGTCCTGGCATTCTTTGCGGCATCCGATGGGATTGT 76596 Query 94560 TTTTGAGAATATCAATAACAACTTTGCTGATGAGGTGCAATCCTCTGAAGCGAGATCCTT 94619 ||||||| || | ||| | | ||||||||| | | || || ||| ||| Sbjct 76595 AAATGAGAATCTCGTGGAGCGCTTCAGTCAGGAGGTGCAAATCACAGAGGCACGATTCTT 76536 Query 94620 CTATGCGTATCAG--TGTCATAATGAAATGGTGCATGGGGAGACATACAGTAAACTCATA 94677 ||||| | ||| || ||| || | || ||| | || | |||||| ||||| Sbjct 76535 CTATGGCTTCCAGATTGCCAT--GGAGAATGTACATAGCGAAATGTACAGTTTGCTCATT 76478 Query 94678 GACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCATCCAAACAGTT 94737 || | ||| || |||| |||||| | ||||| | |||||| | || | Sbjct 76477 GATACGTACATACGGGATCCGCAGGAGAAGGACTTCCTCTTCAATGCCATCGAGACGCTG 76418 Query 94738 CCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGATA-CAAAGTCGCGTTC 94796 |||||| | | ||||| || |||||||| | ||||| ||| | | | | || Sbjct 76417 CCGTGTGTGAAGAAGAAGGCCGATTGGGCACTCCAGTGGATTGCCAGCCAGGAAGC-AAA 76359 Query 94797 CTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTT 94856 || | || | || | || |||||| |||||||| || |||||| ||| ||| Sbjct 76358 TTTCGGCGAAAGGGTCATTGCCTTTGCGGCAGTTGAGGGGATTTTCTTCAGCGGTAGCTT 76299 Query 94857 CTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGA 94916 | | | || | ||||||||| || || ||||||| || ||| ||| ||| || Sbjct 76298 CGCCTCAATCTTCTGGCTCAAGTCACGCGGCATCATGCCCGGACTCACGTTCAGCAATGA 76239 Query 94917 GCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGCG 94956 ||| || || || || ||||| |||||| || |||||| Sbjct 76238 GCTCATTTCACGCGATGAGGGCCTCCACTGTGACTTTGCG 76199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583176722955680