Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lutzomyia_20longipalpis_20[genbank_20GCA_5F000265325.1_202012-06-11] 11,532 sequences; 154,229,266 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq24 197 2e-45 seq825 168 8e-37 seq1176 158 1e-33 seq2439 113 5e-20 >seq24 Length=280856 Score = 197 bits (218), Expect = 2e-45 Identities = 183/231 (79%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 27402 TATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTC 27461 || |||||| |||||||| ||||| | || || ||||| || ||||||||||| ||| | Sbjct 39345 TAGAATGCAGATCTTTGTGAAGACTTTAACGGGTAAGACCATCACTCTTGAGGTCGAGCC 39404 Query 27462 AGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGA 27521 | ||||| |||| ||| ||||||| || || |||||||||||||| ||||| ||||| Sbjct 39405 ATCTGATACGATTGAGAATGTGAAGGCAAAGATCCAGGACAAGGAGGGCATTCCCCCAGA 39464 Query 27522 CCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTA 27581 |||||||||| | || |||||||| |||||||||||||||| ||||| || | || || Sbjct 39465 CCAGCAGCGTTTGATCTTTGCTGGCAAGCAACTCGAGGATGGGCGTACGCTCTCCGATTA 39524 Query 27582 TAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||| | || |||||||| | | |||||| || | |||||||| ||||| Sbjct 39525 CAATATTCAGAAGGAATCTA--CCTCATCTCGTTCTCCGTCTTCGTGGTGG 39573 >seq825 Length=38805 Score = 168 bits (186), Expect = 8e-37 Identities = 174/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || || || || || || || || ||||| || || |||||||| || | Sbjct 12097 AATGCAGATTTTCGTGAAAACTCTCACGGGGAAGACCATCACCCTTGAGGTCGAACCCTC 12038 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 |||| |||| |||| | ||||| ||||||||||| || |||||||| ||||| || || Sbjct 12037 GGATACAATTGAAAATGTCAAGGCGAAAATTCAGGATAAAGAGGGAATCCCTCCGGATCA 11978 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 ||||||||| || ||||| || ||||| || ||||||| || ||||| | ||||| || Sbjct 11977 GCAGCGTCTCATCTTTGCCGGGAAGCAGCTAGAGGATGGGCGCACCCTCTCCGACTACAA 11918 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| ||||| || ||| | || |||||||||| ||||| Sbjct 11917 CATCCAGAAGGAGTCCACCCTCCATTTGGTGCTGCGTCTTCGTGGTGG 11870 >seq1176 Length=25388 Score = 158 bits (174), Expect = 1e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| || || || || || ||||| || || || ||||||||| | Sbjct 17492 ATGCAGATCTTTGTGAAAACACTCACAGGGAAGACGATCACCCTCGAGGTTGAGCCGTCA 17433 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||| | ||| | || ||||||||||||||||| || || ||||| ||||| ||| Sbjct 17432 GATACCATCGAGAATGTAAAAGCTAAAATTCAGGACAAAGAAGGCATTCCGCCAGATCAG 17373 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || || || ||||| || || |||| ||||| | | ||||| || Sbjct 17372 CAGCGTCTCATCTTCGCCGGGAAGCAGCTGGAAGATGGGCGTACATTGTCCGACTACAAC 17313 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| |||||||| || || || || || | |||||||| ||||| Sbjct 17312 ATCCAGAAGGAATCAACACTCCACCTTGTGCTCCGTCTTCGTGGTGG 17266 >seq2439 Length=24097 Score = 113 bits (124), Expect = 5e-20 Identities = 307/461 (67%), Gaps = 17/461 (4%) Strand=Plus/Minus Query 80038 GTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGAA 80097 || |||| ||| ||||| ||||| ||||||||| | |||||| | | | || || ||| Sbjct 3954 GTGCGCAAATAATACATCCCCGTTTTGAGGCCCATTTTCCAGGCATGGAAATGAATTGAA 3895 Query 80098 CTGAGCTTCGCAAGTGTGGGGTTCT-CCATGAAGATGTTCAGAGACTGAGACTGACAGAT 80156 |||| ||| || || |||||| ||| | | ||||| | || ||| ||| || Sbjct 3894 GTGAGTTTCCCATA-GTTAGGTTCTGCCACGTAAATGTTGAATGATTGACTTTGATCAAT 3836 Query 80157 GAAAGCCCCACGATCTGCCGCCATTTCAATAATTGACTTTT---GTGGAATTTCCCATAC 80213 ||| |||||||| || || ||||||||||| |||| |||| | | |||||||| || Sbjct 3835 GAAGGCCCCACGGTCAGCTGCCATTTCAATCATTG--TTTTCACCTTG-ATTTCCCACAC 3779 Query 80214 TGTACGATACACCTTACGAAGCTCCTCTGGAATGTCCAG---ATTTTGCACACTGCCACC 80270 || ||||| || ||||| ||||| ||||| ||||| ||| |||||| |||| Sbjct 3778 GGTTTTATACAACTCACGAATATCCTCAGGAATTTCCAGAATATTCTGCACAGAGCCATT 3719 Query 80271 GT---CCTTTACAATTTGATTTTTCAATTCAGACGTCCAGACACCAAGCTTGTGCAGATC 80327 || | || |||||| || |||| |||| |||| | | || | ||||| Sbjct 3718 GTTGGCAATT--AATTTG-TTCTTCATTTCATCATTCCAAAGGCGTAGTTCAGAGAGATC 3662 Query 80328 TTTCACAAGGTGCTTGTTAATCATGACAAACTCTCCCGCGAGGGTGCGACGCAGATACAG 80387 || | || || |||||| || || || || | || ||||| |||| Sbjct 3661 CTTTAACAGATGGCTGTTAACCACTTGGAATTCCCCAGAAAGAACACGACGGGTGTACAT 3602 Query 80388 GTTTGTAGTGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGAGCCGTGCTCGCCGT 80447 || | ||||| || || || | || || || || || || |||||||| ||||| Sbjct 3601 ATTGGATGTGTAGGGTTCGAAGGATTCATTATTGCCAAGAATTTGAGCCGTAGAAGCCGT 3542 Query 80448 CGGCATCGGGCCGACCAACAGTGAATTCCGCAGGCCGTGCT 80488 ||||| || | || | ||| ||||| || | || |||| Sbjct 3541 TGGCATTGGAGCCACAAGCAGGGAATTTCGAACACCATGCT 3501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570228189755840