Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lutzomyia_20longipalpis_20[genbank_20GCA_5F000265325.1_202012-06-11] 11,532 sequences; 154,229,266 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq1371 152 4e-32 >seq1371 Length=16595 Score = 152 bits (168), Expect = 4e-32 Identities = 385/578 (67%), Gaps = 7/578 (1%) Strand=Plus/Plus Query 29876 AGCGGTTCCACGTTATCCAGGTAGACGTGAGCGTCTCCCAGGTTGTGGACAAACTCTCCC 29935 || ||||| |||| || || |||||| ||||| || || ||| |||| || || ||||| Sbjct 8636 AGGGGTTCTACGTGATTCAAGTAGACATGAGCATCACCGAGGGTGTGCACGAAGTCTCCT 8695 Query 29936 GGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTA 29995 || | || | |||| || || ||||| |||||||||| |||||||| ||||| Sbjct 8696 GGCTTGAGATCTGTGATTTGGGCAATCATTCGTGTGAGGAGAGCATAGCTGGCAATGTTG 8755 Query 29996 AAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCG 30055 || |||||||| || |||||||| | || | || || | || |||||||||||||| Sbjct 8756 AATGGTACCCCCAGTCCCATGTCGGCTGAACGTTGATACATTTGGCACGAGAGCTCTCCA 8815 Query 30056 TCGCTCACGTAAAACTGACACATGGC-GTGGCACGGAGGAAGAGCCATGAGGCCCAAGTC 30114 | | |||||| || || ||| ||| ||| || || || || ||||| | | | || Sbjct 8816 TTGGCCACGTAGAATTG-TACAAGGCAGTGACAGGGTGGGAGCGCCATTATGGGGAGATC 8874 Query 30115 TTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTC 30174 || ||||| || | || ||||| || | || || || | | ||| || | Sbjct 8875 CACAGGATTCCATGCACTCATAATGATTCGACGATCAGTGGGCTTCTCGCGGATAAGCTT 8934 Query 30175 CACGGCGTTTTGCAGCTGATCCACCCCCATCCCCG-AGTA-GTCTGCCCTCATGTCCGTG 30232 | | | || || ||||||||||| | ||| ||| || | | ||||| || | Sbjct 8935 TATCACCTCCTGAAGTTGATCCACCCC--TGGCCGTCGTACGTATCACGACATGTACG-G 8991 Query 30233 TACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCC 30292 || || || || || | ||| ||||| || || || || ||||| || |||||||| Sbjct 8992 TAGGGGGCACCAAAGTGACGCCATTGGAATCCATAAACAGGCCCCAGATCACCCTCTTCG 9051 Query 30293 CTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTT 30352 | | || ||||||| ||| |||| | | || | || || ||| | | ||| || | Sbjct 9052 CGATCCTTGAAGCCCATCTCATCCAGATACTCCCGGGTACTGTTACCATTCCAAATGGTG 9111 Query 30353 ACCCCCTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCC 30412 | ||||||| |||||| | | || || || | | |||||| | |||||| Sbjct 9112 ATACCCTTCTGCTGTAGCTCTCGTGCATCCGTAGAGCCGCGTATGAACCAAATAAGCTCC 9171 Query 30413 TCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAG 30450 || | || | ||| ||||| ||||| || || || Sbjct 9172 TCAGCAACACCGCGCCAGAAGACTCTCTTCGTGGTCAG 9209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406253294596944