Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lutzomyia_20longipalpis_20[genbank_20GCA_5F000265325.1_202012-06-11] 11,532 sequences; 154,229,266 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq1371 131 2e-25 >seq1371 Length=16595 Score = 131 bits (144), Expect = 2e-25 Identities = 191/270 (71%), Gaps = 0/270 (0%) Strand=Plus/Plus Query 6538 CCGGAGCCGCTCGATGTGGTTCAGGTAGATATGCGCATCCCCCAACGTATGCACCAGCTC 6597 |||||| | || | ||| |||| ||||| ||| ||||| || | || ||||| | || Sbjct 8632 CCGGAGGGGTTCTACGTGATTCAAGTAGACATGAGCATCACCGAGGGTGTGCACGAAGTC 8691 Query 6598 CCCAGGAACCAACCCCACGACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAAT 6657 || || | | || || || ||||| ||||| ||||| || || ||||| Sbjct 8692 TCCTGGCTTGAGATCTGTGATTTGGGCAATCATTCGTGTGAGGAGAGCATAGCTGGCAAT 8751 Query 6658 GTTGAACGGCACCCCTAACCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTC 6717 |||||| || ||||| | |||||||| | || |||||||| | ||||| || ||||| Sbjct 8752 GTTGAATGGTACCCCCAGTCCCATGTCGGCTGAACGTTGATACATTTGGCACGAGAGCTC 8811 Query 6718 CCCATTCGCGACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAG 6777 ||||| || ||||||||||| ||| ||| || || ||||||||||| | ||||| Sbjct 8812 TCCATTGGCCACGTAGAATTGTACAAGGCAGTGACAGGGTGGGAGCGCCATTATGGGGAG 8871 Query 6778 ATCCTTCGGGTTCCACGCGCACATCACGAT 6807 |||| || ||||| || | ||| | ||| Sbjct 8872 ATCCACAGGATTCCATGCACTCATAATGAT 8901 Score = 131 bits (144), Expect = 2e-25 Identities = 191/270 (71%), Gaps = 0/270 (0%) Strand=Plus/Minus Query 34538 ATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCAC 34597 ||| | ||| | || ||||| || ||||||||| | ||||||||||| || || ||| Sbjct 8901 ATCATTATGAGTGCATGGAATCCTGTGGATCTCCCCATAATGGCGCTCCCACCCTGTCAC 8842 Query 34598 ACCCTCTGCCAATTCTACGTCGCGAATGGGGAGCTGTCCTGCCAGCTCTATCAACGATCG 34657 ||| ||||||||||| || ||||| ||||| || ||||| | |||||||| || Sbjct 8841 TGCCTTGTACAATTCTACGTGGCCAATGGAGAGCTCTCGTGCCAAATGTATCAACGTTCA 8782 Query 34658 GGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAGTTACGCTCTGCTCACGTACATG 34717 | |||||||| | ||||| || ||||||||||| || || ||||| ||||| ||| Sbjct 8781 GCCGACATGGGACTGGGGGTACCATTCAACATTGCCAGCTATGCTCTCCTCACACGAATG 8722 Query 34718 ATCGCTCATGTCGTGGGGTTGGTTCCTGGGGAGCTGGTGCATACGTTGGGGGATGCGCAT 34777 || || || || | | || || || | ||||| || | || ||||| ||| Sbjct 8721 ATTGCCCAAATCACAGATCTCAAGCCAGGAGACTTCGTGCACACCCTCGGTGATGCTCAT 8662 Query 34778 ATCTACCTGAACCACATCGAGCGGCTCCGG 34807 ||||| |||| ||| | || | |||||| Sbjct 8661 GTCTACTTGAATCACGTAGAACCCCTCCGG 8632 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448197782975040