Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lutzomyia_20longipalpis_20[genbank_20GCA_5F000265325.1_202012-06-11] 11,532 sequences; 154,229,266 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq825 93.3 3e-14 >seq825 Length=38805 Score = 93.3 bits (102), Expect = 3e-14 Identities = 161/232 (69%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 27787 AAAATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGC 27846 |||||||| ||||| ||||||||||| || ||||| || || |||| |||||| | Sbjct 12099 AAAATGCAGATTTTCGTGAAAACTCTCACGGGGAAGACCATCACCCTTGAGGTCGAACCC 12040 Query 27847 ACCGA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGG 27904 | || | || | ||| ||||| ||||| || ||||| || | || || Sbjct 12039 TCGGATACAATTGAAAAT--GTCAAGGCGAAAATTCAGGATAAAGAGGGAATCCCTCCGG 11982 Query 27905 AGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATT 27964 | ||||| || | || |||||||| || || | || || | |||| | | ||||| | Sbjct 11981 ATCAGCAGCGTCTCATCTTTGCCGGGAAGCAGCTAGAGGATGGGCGCACCCTCTCCGACT 11922 Query 27965 ACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 |||||||||| || ||| ||| | |||||||| ||||| | ||||| || Sbjct 11921 ACAACATCCAGAAGGAGTCCACCCTCCATTTGGTGCTGCGTCTTCGTGGTGG 11870 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355812384874164