Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lutzomyia_20longipalpis_20[genbank_20GCA_5F000265325.1_202012-06-11] 11,532 sequences; 154,229,266 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq1176 158 3e-33 seq825 140 8e-28 seq24 134 3e-26 >seq1176 Length=25388 Score = 158 bits (174), Expect = 3e-33 Identities = 168/222 (76%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | || |||||||| || || || || || |||||||| || || | | || Sbjct 17271 ACGAAGACGGAGCACAAGGTGGAGTGTTGATTCCTTCTGGATGTTGTAGTCGGACAATGT 17330 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | ||||||||||||||||| || |||||||| || || || || || || |||| || Sbjct 17331 ACGCCCATCTTCCAGCTGCTTCCCGGCGAAGATGAGACGCTGCTGATCTGGCGGAATGCC 17390 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||| |||||||| || || ||| || || |||||||| || || ||||||||||| Sbjct 17391 TTCTTTGTCCTGAATTTTAGCTTTTACATTCTCGATGGTATCTGACGGCTCAACCTCGAG 17450 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||||||||| || ||||| || || ||||| | |||||| Sbjct 17451 GGTGATCGTCTTCCCTGTGAGTGTTTTCACAAAGATCTGCAT 17492 >seq825 Length=38805 Score = 140 bits (154), Expect = 8e-28 Identities = 166/225 (74%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | || || | || || |||||||| || |||||||| || || | ||||| Sbjct 11875 ACGAAGACGCAGCACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGT 11934 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | ||||| || |||||||| || || ||||| || || || || || ||||| | ||| Sbjct 11935 GCGCCCATCCTCTAGCTGCTTCCCGGCAAAGATGAGACGCTGCTGATCCGGAGGGATTCC 11994 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 || || ||||| || || || || ||||| || || || ||| ||| ||||| || Sbjct 11995 CTCTTTATCCTGAATTTTCGCCTTGACATTTTCAATTGTATCCGAGGGTTCGACCTCAAG 12054 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 ||||| ||||| ||||||||||| || || || | ||||||||| Sbjct 12055 GGTGATGGTCTTCCCCGTGAGAGTTTTCACGAAAATCTGCATTTT 12099 >seq24 Length=280856 Score = 134 bits (148), Expect = 3e-26 Identities = 166/226 (73%), Gaps = 2/226 (1%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | || || || ||| | | || || || || || || ||||| | || || Sbjct 39568 ACGAAGACGGAGAACGAGATGAGG--TAGATTCCTTCTGAATATTGTAATCGGAGAGCGT 39511 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | ||||| || || |||||||| || ||||| | || || ||||| || |||| || Sbjct 39510 ACGCCCATCCTCGAGTTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCTGGGGGAATGCC 39451 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 |||||||||||||||||| ||||| || || || || ||||| || ||||| || Sbjct 39450 CTCCTTGTCCTGGATCTTTGCCTTCACATTCTCAATCGTATCAGATGGCTCGACCTCAAG 39391 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTTA 211118 |||||| ||||| ||||| | |||||| ||||| | ||||||| || Sbjct 39390 AGTGATGGTCTTACCCGTTAAAGTCTTCACAAAGATCTGCATTCTA 39345 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1158980730945180