Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lutzomyia_20longipalpis_20[genbank_20GCA_5F000265325.1_202012-06-11] 11,532 sequences; 154,229,266 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq79 96.9 3e-15 >seq79 Length=216850 Score = 96.9 bits (106), Expect = 3e-15 Identities = 490/773 (63%), Gaps = 20/773 (3%) Strand=Plus/Plus Query 4371 ACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCA 4430 ||||| | || || || || ||||| || ||||| |||||||| ||| || || || Sbjct 76020 ACAAGAAGACGATCTGCCACGAATTCAATGTACTGCGACATGAGTTGGCAATTCATGCCC 76079 Query 4431 ATTAATCTCA-CAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGT 4489 | | | ||| |||| || || | ||| | || || || || || || || ||||| Sbjct 76080 AGCA-TGTCAACAGGAAGGGCATCTGTGAGGAATTCCTGCTCAATGGTCACAGCTTCGCG 76138 Query 4490 GATTATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACA 4549 || || || | || || || || || || | || | || |||| || ||| Sbjct 76139 AATGATTTCGATGATGCGCTCCTTTGAGGGCTTCTGCACGAGGTGCTTGAACATTAGACA 76198 Query 4550 CGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCC 4609 |||||| ||||| || | || || || | ||| || || || ||||| | ||| Sbjct 76199 CGCAAAGTCACAGTGGAGGCCCTCATCGCGTGAAATGAGCTCATTGCTGAACGTGAGTCC 76258 Query 4610 GGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATAT 4669 |||||| | || | || ||||| || || | ||| || || ||||| || Sbjct 76259 GGGCATGATGCCGCGTGACTTGAGCCAGAAGATTGAGGCGAAGCTACCGCTGAAGAAAAT 76318 Query 4670 GCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACG----AGCTGGCTT--TGTC 4723 || || || || ||||| || ||| ||||| || | | |||| || | Sbjct 76319 CCCCTCAACTGCCGCAAAGGC----AAT---GACCCTTTCGCCGAAATTTGCTTCCTGGC 76371 Query 4724 TTT-AATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAG 4782 | |||||| | | |||||| | || || ||||| || ||||| | || | || | Sbjct 76372 TGGCAATCCACTGGAGTGCCCAATCGGCCTTCTTCTTCACACACGGCAGCGTCTCGATGG 76431 Query 4783 CGTTAAATA--ATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCT 4840 | || || | | | ||| | | || || | || || || || || || | || Sbjct 76432 CATTGAAGAGGAAGTCCTTCT--CCTGCGGATCCCGTATGTACGTATCAATGAGCAAACT 76489 Query 4841 ATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTC 4900 |||||||| ||||| ||| || || |||||||| || || || ||| ||| || || Sbjct 76490 GTACATTTCGCTATGTACATTCTCCATGGCAATCTGGAAGCCATAGAAGAATCGTGCCTC 76549 Query 4901 TGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACT 4960 ||| | ||| || || | || || | || || | || || ||||| || || || Sbjct 76550 TGTGATTTGCACCTCCTGACTGAAGCGCTCCACGAGATTCTCATTTACAATCCCATCGGA 76609 Query 4961 GGCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTT 5020 || ||||| || |||| || || || || | | |||| | ||| | || Sbjct 76610 TGCCGCAAAGAATGCCAGGACGTGGCTAATGAATTTCCTTTCGCAATCCTTCAAAGCATT 76669 Query 5021 CCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGC 5080 |||||| || ||| | || || ||||| ||||| |||||||| || || || || Sbjct 76670 CCAGTGATCCATATCCCGGGATAGGTCTACTTCCTCAACTGTCCAAAATGAGGCCTCGGC 76729 Query 5081 TTTTTTGTACATAGACCAAATATCAGGATACTGAATCGGAAGTATGACAAATC 5133 ||||||||||| ||| | ||| | || ||||| || | | ||||||| Sbjct 76730 CTTTTTGTACATCTCCCACACATCGTGGTATTGAATGGGGAAGACAACAAATC 76782 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426989579780156