Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lutzomyia_20longipalpis_20[genbank_20GCA_5F000265325.1_202012-06-11] 11,532 sequences; 154,229,266 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq1371 161 7e-35 >seq1371 Length=16595 Score = 161 bits (178), Expect = 7e-35 Identities = 387/578 (67%), Gaps = 7/578 (1%) Strand=Plus/Plus Query 27142 AGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCC 27201 || ||||| ||||||| || |||||| ||||| || || |||||||| || || ||||| Sbjct 8636 AGGGGTTCTACGTGATTCAAGTAGACATGAGCATCACCGAGGGTGTGCACGAAGTCTCCT 8695 Query 27202 GGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTA 27261 || | || | |||| || || ||||| |||||||||| |||||||| ||||| Sbjct 8696 GGCTTGAGATCTGTGATTTGGGCAATCATTCGTGTGAGGAGAGCATAGCTGGCAATGTTG 8755 Query 27262 AAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCA 27321 || |||||||| || |||||||| | || | || || | || ||||||||||||||| Sbjct 8756 AATGGTACCCCCAGTCCCATGTCGGCTGAACGTTGATACATTTGGCACGAGAGCTCTCCA 8815 Query 27322 TCGCTTACGTAAAACTG-ACATATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTC 27380 | | ||||| || || ||| | | ||| || || || || ||||| | | | || Sbjct 8816 TTGGCCACGTAGAATTGTACA-AGGCAGTGACAGGGTGGGAGCGCCATTATGGGGAGATC 8874 Query 27381 TTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTC 27440 || ||||| || | || ||||| || | || || || | | ||| || | Sbjct 8875 CACAGGATTCCATGCACTCATAATGATTCGACGATCAGTGGGCTTCTCGCGGATAAGCTT 8934 Query 27441 CACGGCGTTTTGCAGCTGATCCACCCCCATCCCCG-AGTA-GTCTACCCTCATGTCCGTG 27498 | | | || || ||||||||||| | ||| ||| || | | ||||| || | Sbjct 8935 TATCACCTCCTGAAGTTGATCCACCCC--TGGCCGTCGTACGTATCACGACATGTACG-G 8991 Query 27499 TACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCC 27558 || || || || || | ||||||||| || || || || ||||| || |||||||| Sbjct 8992 TAGGGGGCACCAAAGTGACGCCATTGGAATCCATAAACAGGCCCCAGATCACCCTCTTCG 9051 Query 27559 CTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTT 27618 | | || ||||||| ||| |||| | | || | || || ||| | | ||| || | Sbjct 9052 CGATCCTTGAAGCCCATCTCATCCAGATACTCCCGGGTACTGTTACCATTCCAAATGGTG 9111 Query 27619 ACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCC 27678 | ||||||| |||||| | | || || || | | |||||| | |||||| Sbjct 9112 ATACCCTTCTGCTGTAGCTCTCGTGCATCCGTAGAGCCGCGTATGAACCAAATAAGCTCC 9171 Query 27679 TCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAG 27716 || | || | ||| ||||| ||||| || || || Sbjct 9172 TCAGCAACACCGCGCCAGAAGACTCTCTTCGTGGTCAG 9209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369455267148692