Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lutzomyia_20longipalpis_20[genbank_20GCA_5F000265325.1_202012-06-11] 11,532 sequences; 154,229,266 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq2439 499 4e-136 seq79 248 1e-60 >seq2439 Length=24097 Score = 499 bits (552), Expect = 4e-136 Identities = 1237/1858 (67%), Gaps = 52/1858 (3%) Strand=Plus/Minus Query 76773 TTATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCA 76832 ||||||| ||||| || || | | | || ||||| || || | ||| ||||| || Sbjct 3993 TTATCCACAGTAAATTGGATGGCATTGGCAGCTGGTTTAGTGCGCAAATAATACATCCCC 3934 Query 76833 GTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGA 76892 ||||| || |||| |||| | | |||||| || || ||||| ||| |||| Sbjct 3933 GTTTTGAGGCCCATTTTCCAGGCATGGAAATGAATTGAAGTGAGTTTCCCATAGTTAGGT 3874 Query 76893 TCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCC 76952 || || | | ||| || | || ||||||||||| ||||| || || | ||||| ||| Sbjct 3873 TCTGCCACGTAAATGTTGAATGATTGACTTTGATCAATGAAGGCCCCACGGTCAGCTGCC 3814 Query 76953 ATTTTTATAATGGTCTT----TTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGAT 77008 |||| || || || || |||| ||||||| | ||||| | | | || Sbjct 3813 ATTTCAATCATTGTTTTCACCTTGA----TTTCCCACACGGTTTTATACAACTCACGAAT 3758 Query 77009 ATCATCTGGAAGGTTTG-----TATTTTGAATGGAACCACCATCTGATATAATTGTATTC 77063 ||| || |||| ||| |||| || | || ||| | | || | | | ||| Sbjct 3757 ATCCTCAGGAA--TTTCCAGAATATTCTGCACAGAGCCATTGTTGGCAATTAATTTGTTC 3700 Query 77064 TTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACT 77123 || || ||||||||||| | || | | | | | | ||||| ||||| Sbjct 3699 TTCATTTCATCATTCCAAAGGCGTAGTTCAGAGAGATCCTTTAACAGATGGCTGTTAACC 3640 Query 77124 ATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACA 77183 | ||| ||||| ||||| | || | ||| ||||| ||||| || || ||||| | Sbjct 3639 ACTTGGAATTCCCCAGAAAGAACACGACGGGTGTACATATTGGATGTGTAGGGTTCGAAG 3580 Query 77184 GATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAA 77243 |||||||| || || | ||||||||| |||||||| |||||||| || ||||| | | Sbjct 3579 GATTCATTATTGCCAAGAATTTGAGCCGTAGAAGCCGTTGGCATTGGAGCCACAAGCAGG 3520 Query 77244 CTATTTCTGAGACCATG-TGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATC 77302 ||||| | |||||| || | || || | || | | | ||||| ||||||||| Sbjct 3519 GAATTTCGAACACCATGCTGAGCA-ATCTTTGCCTTCAATTCATCCCAATTCCAAAGATC 3461 Query 77303 TGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCATT 77362 | || || ||| | |||||| || |||||||| || || | |||||| Sbjct 3460 CGTTGGCTTTCTATTCCACATATCGTACTGCAGAATTCCCTTGCTTACTGGACTTCCATT 3401 Query 77363 ATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTA 77422 || || ||||| ||||| | ||||| || |||||||| || || | ||||| || Sbjct 3400 GTACGTCTCATATGGTCCGAGCTTCTCAGCGAGCTCACAACTAGCCTCAAGAGCTCCATA 3341 Query 77423 ATAAATTGTTTCGAAAATCTTCTTATTGAGAT-CTTGTGCTTCAATACTATCAAACGGAT 77481 ||||| ||||| || || | | ||||| | |||| ||||| | |||||| | || Sbjct 3340 GTAAATGGTTTCAAAGATTTGTTGGTTGAGTTTCTTG-GCTTCTTTGCTATCATATGGGA 3282 Query 77482 AATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTC 77541 | | ||||| | ||||| |||| || ||||||||||| ||||| ||||| |||| Sbjct 3281 GGCGCATGAGAATGTAAGCATCCGCTAGACCTTGAACTCCAATTCCAATCGGTCTGTGTC 3222 Query 77542 TCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGA 77601 | ||||||| || ||||| || | || || || || |||||||||| ||| |||| Sbjct 3221 GCATATTGGAGCGCTTTGCTTCGGGTACGGGGTAGTAGTTGATGTCTATAACTTTGTTGA 3162 Query 77602 GATTTC---TAACAA-CTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAA--TCTTC 77655 |||| | | |||| || | | | || |||||| || ||||||| | |||| Sbjct 3161 GATTGCGTGTGACAATCTTCGTGA----CGGACTTTAGCTTCTCAAAATCATACGTCTT- 3107 Query 77656 CATCT---ATAACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCAT 77712 ||| | |||||||| || | || || ||||||| ||| || || || | ||||| Sbjct 3106 -ATCGGGCAGTACAAACATATTAAGTGCAATTGATGCTAAATTGCACACAGCAATCTCAT 3048 Query 77713 TAGCGTTGGC---ATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCA 77769 | |||| ||||| | |||||||| || || || ||||| || || || | Sbjct 3047 ---CCTTGGACGAATATTCAACGATCTCGGTGCAGAGGTTGCTACAGCGAATTGTACCAA 2991 Query 77770 GATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGG 77829 ||| || || || ||||| || |||| |||||| || || ||| |||| || || | Sbjct 2990 TATTCTGCTGATTACTCTTACGGTTACATGCGTCCTTGTACAGCATATACGGCGTTCCCG 2931 Query 77830 TTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATCATAGATTTGT 77889 |||| | || || || || | ||| | ||| |||| || | || ||| Sbjct 2930 TTTCTACTTGACTTTGAATGATGGCAAACCAAAGATCTCGAGCTGGTACCTTACGAATGT 2871 Query 77890 ATCGCCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCAT 77949 | | | ||| ||| || | || || | | |||||| || ||||| |||| Sbjct 2870 ACTGACCTTCTGCTTCGTACTTTGTGTACAATTTATTAAATTCTTCACCCCAGCAATCAA 2811 Query 77950 CCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTT 78009 |||||||||||| | || |||||||| | ||| |||||||| || || || | Sbjct 2810 ACAATCCAGGGCACTTGTTAGGGCACATGAGACTCCATTCACCATCCTCGGAGACACGCT 2751 Query 78010 TCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCAT 78069 |||||| | |||||| ||||| || ||| || |||||||| | || | ||| | Sbjct 2750 GCATAAATAAATCAGGAATCCAGAGCGCATAGAAGAGATCTCGTGCTCGTGCCTTTTCCT 2691 Query 78070 TTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGAT 78129 | || |||||||||||||| || || || || | ||||| |||||| ||||| || | Sbjct 2690 TACCGGTATTCTTTTTAAGGTCTAGGAATTCAAAGATATCCCCATGCCAGGGTTCAAGGT 2631 Query 78130 ATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTAT 78189 ||||||| | | || || || ||||| || || ||||| | || | ||| || | | Sbjct 2630 ATATTGCAAAGGCACCTGGGCGCTTATTCCCACCTTGATCAACGTAGCAGGCAGTAGTGT 2571 Query 78190 TATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAAC 78249 | || || | | ||| || | | || || ||||| ||||| ||||||| ||| | || Sbjct 2570 TGTAGACGCGAAGCATCGGTACGAGTCCATTCGATGTGCCATTGGTTCCAGCAATGTGAC 2511 Query 78250 TTCCACTTGCGCGAATATTACTAATGGATATC-CCTATTCCTCCTGCCATCTTAGATATT 78308 | |||| || ||||| | | | || | || || |||||||| ||| || ||| Sbjct 2510 TACCACGAGCTCGAAT-GCAGTGAGTATTAACACCAATCCCTCCTGCAGACTTTGAGATT 2452 Query 78309 AGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGA 78368 |||||||| |||||| ||||||||||||||| || ||||||||||| |||| || Sbjct 2451 AGAGCGCATTGTTTCAGTGTATCGTAGATACCATCAATACTGTCATCAGCCATGGACAGG 2392 Query 78369 AGAAAACAGCTAGACATTTGATGATGAAC---AGTTCCTGCATTAAATAATGTCGGAGAT 78425 || ||||| |||| | | ||| | || ||| | || ||| | ||| || ||| Sbjct 2391 AGGAAACA---AGACGATAGCTGAGGCACTGGAGTGGCAGCTGCAAAGAGTGTTGGTGAT 2335 Query 78426 GCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCC 78485 || ||||| || | || || || || ||||| || ||||| |||| | |||| Sbjct 2334 GCGTGCGTGAAATACCGTTGTGATAGAAGGTTGTACGTCTCAATGGCTGCAGCAATGT-- 2277 Query 78486 CATT--GATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCT 78543 |||| |||||||| || | ||| ||||||| ||||||||| || |||||| | | | Sbjct 2276 CATTCCCGTGAATTCCCACAGATACTCGCATCAGCATATGCTGGGGCCTTTCAGCGATTT 2217 Query 78544 TATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 78601 | || |||| || |||||| | || | || || || ||||||||| |||| Sbjct 2216 TCCCGCCGATCTTCATTAAATATGATCTCTCGAGTGTCTTGAAGCCAAAATAGCTGTA 2159 >seq79 Length=216850 Score = 248 bits (274), Expect = 1e-60 Identities = 417/601 (69%), Gaps = 3/601 (0%) Strand=Plus/Plus Query 48126 TGTTTAAACATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCG 48185 || || ||||||| ||| ||||| ||||| || || || ||||| | ||| | || Sbjct 76182 TGCTTGAACATTAGACACGCAAAGTCACAGTGGAGGCCCTCATCGCGTGAAATGAGCTCA 76241 Query 48186 TTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAA 48245 || || ||||| |||||||| | || ||| |||||||| || |||| ||||| Sbjct 76242 TTGCTGAACGTGAGTCCGGGCATGATGCCGCGTGACTTGAGCCAGAAGATTGAGGCGAAG 76301 Query 48246 GATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTG 48305 || ||||| || || || || |||||||| || | | || || ||| || | Sbjct 76302 CTACCGCTGAAGAAAATCCCCTCAACTGCCGCAAAGGCAATGACCCTTTCGCCGAAATTT 76361 Query 48306 GCTTCGTTG-TGT--ATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATT 48362 ||||| | | || |||||| | |||||||||| ||||||||||| ||||| |||| Sbjct 76362 GCTTCCTGGCTGGCAATCCACTGGAGTGCCCAATCGGCCTTCTTCTTCACACACGGCAGC 76421 Query 48363 GTTTCTATAGCATTAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATT 48422 || || || ||||| ||||| |||| || || | ||| | ||| ||||| || Sbjct 76422 GTCTCGATGGCATTGAAGAGGAAGTCCTTCTCCTGCGGATCCCGTATGTACGTATCAATG 76481 Query 48423 AAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACAT 48482 | | ||| ||||||||| || | ||| || || || ||||| || || || || || Sbjct 76482 AGCAAACTGTACATTTCGCTATGTACATTCTCCATGGCAATCTGGAAGCCATAGAAGAAT 76541 Query 48483 CTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATT 48542 | || |||||||| || |||||| || || || || | | |||||||||||| || Sbjct 76542 CGTGCCTCTGTGATTTGCACCTCCTGACTGAAGCGCTCCACGAGATTCTCATTTACAATC 76601 Query 48543 CCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTC 48602 ||||| || ||||| ||||| | || || |||| || | ||||| || Sbjct 76602 CCATCGGATGCCGCAAAGAATGCCAGGACGTGGCTAATGAATTTCCTTTCGCAATCCTTC 76661 Query 48603 AGTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGAT 48662 | |||||||| || ||||| |||| |||||||| ||| ||||||||||||| Sbjct 76662 AAAGCATTCCAGTGATCCATATCCCGGGATAGGTCTACTTCCTCAACTGTCCAAAATGAG 76721 Query 48663 GCCTCTGCTTTTTTATACATATTCCATATATCACTGTATTGGATTGGGAAAATAACAAAT 48722 ||||| || ||||| ||||| | ||| | ||| |||||| || ||||| | ||||||| Sbjct 76722 GCCTCGGCCTTTTTGTACATCTCCCACACATCGTGGTATTGAATGGGGAAGACAACAAAT 76781 Query 48723 C 48723 | Sbjct 76782 C 76782 Score = 93.3 bits (102), Expect = 6e-14 Identities = 90/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 48608 ATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTC 48667 |||||||| || ||||| |||| |||||||| ||| ||||||||||||| ||||| Sbjct 78676 ATTCCAGTGATCCATATCCCGGGATAGGTCTACTTCCTCAACTGTCCAAAATGAGGCCTC 78735 Query 48668 TGCTTTTTTATACATATTCCATATATCACTGTATTGGATTGGGAAAATAACAAATC 48723 || ||||| ||||| | ||| | ||| |||||| || ||||| | |||||||| Sbjct 78736 GGCCTTTTTGTACATCTCCCACACATCGTGGTATTGAATGGGGAAGACAACAAATC 78791 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694568663492480