Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lutzomyia_20longipalpis_20[genbank_20GCA_5F000265325.1_202012-06-11] 11,532 sequences; 154,229,266 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq1176 132 1e-25 seq825 127 5e-24 >seq1176 Length=25388 Score = 132 bits (146), Expect = 1e-25 Identities = 157/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| ||||| || || || || || || ||||||||||| |||| || || | |||||| Sbjct 17280 GAGCACAAGGTGGAGTGTTGATTCCTTCTGGATGTTGTAGTCGGACAATGTACGCCCATC 17339 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 ||| || |||||||||||||| || | |||||| || | || || ||||| || || Sbjct 17340 TTCCAGCTGCTTCCCGGCGAAGATGAGACGCTGCTGATCTGGCGGAATGCCTTCTTTGTC 17399 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 |||||||| ||| ||| |||| | | | ||||| ||| || || || || || || Sbjct 17400 CTGAATTTTAGCTTTTACATTCTCGATGGTATCTGACGGCTCAACCTCGAGGGTGATCGT 17459 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| || ||||| |||| |||||| Sbjct 17460 CTTCCCTGTGAGTGTTTTCACAAAGATCTGCAT 17492 >seq825 Length=38805 Score = 127 bits (140), Expect = 5e-24 Identities = 157/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || | ||| || || ||||| || ||||||||||| |||| | || | |||||| Sbjct 11885 AGCACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGCCCATCC 11944 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 ||||| |||||||| ||||| || | |||||| |||| | |||||| || || || Sbjct 11945 TCTAGCTGCTTCCCGGCAAAGATGAGACGCTGCTGATCCGGAGGGATTCCCTCTTTATCC 12004 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 |||||||| |||||| | || | | || || || || ||||| || || || Sbjct 12005 TGAATTTTCGCCTTGACATTTTCAATTGTATCCGAGGGTTCGACCTCAAGGGTGATGGTC 12064 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || ||||||||||| |||||||| | ||||||||| Sbjct 12065 TTCCCCGTGAGAGTTTTCACGAAAATCTGCATTTT 12099 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153650318649972