Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lutzomyia_20longipalpis_20[genbank_20GCA_5F000265325.1_202012-06-11] 11,532 sequences; 154,229,266 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq825 136 3e-27 seq1176 116 3e-21 seq24 102 6e-17 >seq825 Length=38805 Score = 136 bits (150), Expect = 3e-27 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 44125 CAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTC 44184 || ||||| || || ||| |||||| ||||||||||| |||| ||| |||| | || Sbjct 11884 CAGCACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGCCCATC 11943 Query 44185 GTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTC 44244 || |||||||||||||||||||| | |||||||||||| | ||| | || || || || Sbjct 11944 CTCTAGCTGCTTCCCGGCAAAGATGAGACGCTGCTGATCCGGAGGGATTCCCTCTTTATC 12003 Query 44245 CGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGT 44304 | || ||| ||| | || | || || || | || ||| ||||| | || || || Sbjct 12004 CTGAATTTTCGCCTTGACATTTTCAATTGTATCCGAGGGTTCGACCTCAAGGGTGATGGT 12063 Query 44305 CTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| |||||||| || |||||||| || ||||| Sbjct 12064 CTTCCCCGTGAGAGTTTTCACGAAAATCTGCAT 12096 >seq1176 Length=25388 Score = 116 bits (128), Expect = 3e-21 Identities = 154/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||| ||||| || || ||||| ||||||||||| |||| | | ||| | || || Sbjct 17283 CACAAGGTGGAGTGTTGATTCCTTCTGGATGTTGTAGTCGGACAATGTACGCCCATCTTC 17342 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 ||||||||||||||| ||||| | |||||||||||||| || | ||||| || ||| | Sbjct 17343 CAGCTGCTTCCCGGCGAAGATGAGACGCTGCTGATCTGGCGGAATGCCTTCTTTGTCC-T 17401 Query 44248 TATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 | || |||| | ||| | ||||| || | | || ||||| | || ||||||| Sbjct 17402 GAATTTTAGCTTTTACATTCTCGATGGTATCTGACGGCTCAACCTCGAGGGTGATCGTCT 17461 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || ||||| || ||||| ||||| ||||| Sbjct 17462 TCCCTGTGAGTGTTTTCACAAAGATCTGCAT 17492 >seq24 Length=280856 Score = 102 bits (112), Expect = 6e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206 ||||| || || |||||||||| ||| ||| | || || || ||||| || |||||| Sbjct 39539 TCCTTCTGAATATTGTAATCGGAGAGCGTACGCCCATCCTCGAGTTGCTTGCCAGCAAAG 39480 Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT 44266 |||||||||||||| |||| || | || ||||| ||| ||||| ||||| | Sbjct 39479 ATCAAACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTTGCCTTCACATTC 39420 Query 44267 CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACG 44326 | || || || | | || ||||| | || || ||||| ||||| | |||||||| Sbjct 39419 TCAATCGTATCAGATGGCTCGACCTCAAGAGTGATGGTCTTACCCGTTAAAGTCTTCACA 39360 Query 44327 AAGATTTGCAT 44337 ||||| ||||| Sbjct 39359 AAGATCTGCAT 39349 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359939804699244