Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lutzomyia_20longipalpis_20[genbank_20GCA_5F000265325.1_202012-06-11] 11,532 sequences; 154,229,266 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq1176 178 3e-39 seq825 156 1e-32 >seq1176 Length=25388 Score = 178 bits (196), Expect = 3e-39 Identities = 163/206 (79%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || |||||||| |||||||| || ||||||||||||||||| || ||||| Sbjct 17489 CAGATCTTTGTGAAAACACTCACAGGGAAGACGATCACCCTCGAGGTTGAGCCGTCAGAT 17430 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||||||||| || ||| || ||||||||||||||||| || || || || ||||| Sbjct 17429 ACCATCGAGAATGTAAAAGCTAAAATTCAGGACAAAGAAGGCATTCCGCCAGATCAGCAG 17370 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || ||||| |||||||| | || | |||| || ||| || Sbjct 17369 CGTCTCATCTTCGCCGGGAAGCAGCTGGAAGATGGGCGTACATTGTCCGACTACAACATC 17310 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || ||||||||||| || ||||| Sbjct 17309 CAGAAGGAATCAACACTCCACCTTGT 17284 >seq825 Length=38805 Score = 156 bits (172), Expect = 1e-32 Identities = 161/210 (77%), Gaps = 3/210 (1%) Strand=Plus/Minus Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974 ||||||| | |||||||||||||||||||| || || || |||||||| ||||| ||| Sbjct 12099 AAAATGC---AGATTTTCGTGAAAACTCTCACGGGGAAGACCATCACCCTTGAGGTCGAA 12043 Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034 ||| || || || || || ||||| || |||||||| ||||| |||||||||||| Sbjct 12042 CCCTCGGATACAATTGAAAATGTCAAGGCGAAAATTCAGGATAAAGAGGGAATCCCTCCG 11983 Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094 || ||||| || || ||||| ||||| || ||||| || ||||| | || || |||| Sbjct 11982 GATCAGCAGCGTCTCATCTTTGCCGGGAAGCAGCTAGAGGATGGGCGCACCCTCTCCGAC 11923 Query 178095 TATAACGTCCAAAAAGAATCAACACTGCAT 178124 || ||| |||| || || || || || ||| Sbjct 11922 TACAACATCCAGAAGGAGTCCACCCTCCAT 11893 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203553344201208