Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lutzomyia_20longipalpis_20[genbank_20GCA_5F000265325.1_202012-06-11] 11,532 sequences; 154,229,266 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq825 120 3e-22 seq24 111 1e-19 >seq825 Length=38805 Score = 120 bits (132), Expect = 3e-22 Identities = 169/233 (73%), Gaps = 6/233 (3%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||||| ||| || ||| ||||||||| ||||| ||||||||| Sbjct 11870 CCACCACGAAGACGCAGCACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 11929 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||||||| | || || |||||||| ||||| || || || ||||| || |||| || Sbjct 11930 AGGGTGCGCCCATCCTCTAGCTGCTTCCCGGCAAAGATGAGACGCTGCTGATCCGGAGGG 11989 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGA---CTCC 41812 | | ||| || ||| ||| |||| || | || || | ||| | ||| || Sbjct 11990 ATTCCCTCTTTATCC-TGAATTTTCGCCTTGACATTTTCA-ATTGTATC-CGAGGGTTCG 12046 Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 ||||| | || || || || ||||| || || || |||||||||||||| || Sbjct 12047 ACCTCAAGGGTGATGGTCTTCCCCGTGAGAGTTTTCACGAAAATCTGCATTTT 12099 >seq24 Length=280856 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | || ||||| || | | ||||||||||| || || ||||| Sbjct 39574 GCCACCACGAAGACGGAGAACGAGATG-AGGTAGAT-TCCTTCTGAATATTGTAATCGGA 39517 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 ||| || ||| | || ||||| |||||||| || || |||| ||||| ||||| | ||| Sbjct 39516 GAGCGTACGCCCATCCTCGAGTTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCTGGGGG 39457 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCAC 41814 || || |||||||||| ||| ||| ||||| | | || || | ||| || Sbjct 39456 AATGCCCTCCTTGTCCTGGATCTTTGCCTTCACATTCTCAATCGTATCAGATGGCTCGAC 39397 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| | || || || |||||||| | ||||| || || |||||||| Sbjct 39396 CTCAAGAGTGATGGTCTTACCCGTTAAAGTCTTCACAAAGATCTGCAT 39349 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462237358878400