Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Maconellicoccus_20hirsutus_20[genbank_20GCA_5F900064465.1_202016-03- 26] 12,889 sequences; 163,044,544 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq6746 105 1e-17 >seq6746 Length=106662 Score = 105 bits (116), Expect = 1e-17 Identities = 229/335 (68%), Gaps = 12/335 (4%) Strand=Plus/Minus Query 35396 GGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATAT---GAT 35452 || ||| | || || | || |||||||| ||| | |||||||| || || || ||| Sbjct 4130 GGGGATCTCGGTCCTATTTATGGATTCCAGTGGAGGCATTTTGGAGCCGAGTACAAAGAT 4071 Query 35453 ACCTGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAATATACTAAAGACC 35512 | ||||| ||||||| ||||| | || ||||||||||| |||||| |||| | Sbjct 4070 A--TGTTCG-CCGATTACACTGGCCAAGGCGTTGATCAATTGCAAAATATAATAAATATG 4014 Query 35513 CTGAGAGAAAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATCTT 35572 | | | ||||| | |||||||| |||||| | || ||||||||| | || || Sbjct 4013 ATCAAAACCAATCCTAACGATAGAAGAATGATTTTATGTGCCTGGAATCCTGTTGA--TT 3956 Query 35573 CACCT--TATGGCTCTTCCTCCATGCCACATGACT-GCTCAATTTTATGTGGCTAATGGA 35629 |||| ||||| | ||||| || || || | | ||||||||||| |||||||| Sbjct 3955 TACCTAAAATGGCATTACCTCCGTGTCA-TTGCTTAGTGCAATTTTATGTAGCTAATGGT 3897 Query 35630 GAATTGTCGTGCCAGTTGTATCAGCGAAGCGGAGATGTCGGGTTGGGCGTGCCCTTCAAT 35689 || | ||||| | ||||||| || | ||| | || | || || || |||||| Sbjct 3896 GAGCTTTCGTGTCTCATGTATCAACGCTCTGCTGATATGGGTCTAGGTGTACCTTTCAAT 3837 Query 35690 ATTGCATCATACTCTCTTCTGACTCATCTGATGGC 35724 || ||| ||||| | || ||| || |||| || Sbjct 3836 ATAGCAAGTTACTCCTTGCTCACTTATATGATCGC 3802 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989420579788995