Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Maconellicoccus_20hirsutus_20[genbank_20GCA_5F900064465.1_202016-03- 26] 12,889 sequences; 163,044,544 total letters Query= NC_008953.1 Length=3935 Score E Sequences producing significant alignments: (Bits) Value seq7989 80.6 7e-12 >seq7989 Length=79767 Score = 80.6 bits (88), Expect = 7e-12 Identities = 106/147 (72%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 3334 CCCATGAAGCGAGTCTTTCCAACAATCACTCGATGTACTTTTCACAAATACGGTCCTTCG 3393 || ||| ||| || ||||| | | | || |||||| || ||||||||||||||||| Sbjct 10180 CCTATGGCGCGGGTATTTCCCAAAGTAACCAAATGTACCTTCCACAAATACGGTCCTTCC 10239 Query 3394 GGCTCCCTGGAAAACTACGAGGGACTCTGCATCCTCCCGGAGAACGTGGTCAACGAGAAG 3453 || || || | || | ||| || | ||| | || ||| |||| | || ||||| || Sbjct 10240 GGTTCGGTGCAGAAATTCGACGGCTTGTGCGTGCTACCGCTGAACATCGTTAACGAAAAA 10299 Query 3454 ATCTACATTTTCCTCTGGTTCTGGTTC 3480 |||||| | || | |||||||||||| Sbjct 10300 ATCTACGTATTTTTATGGTTCTGGTTC 10326 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12478240651500