Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Maconellicoccus_20hirsutus_20[genbank_20GCA_5F900064465.1_202016-03- 26] 12,889 sequences; 163,044,544 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq12418 91.5 3e-13 >seq12418 Length=52976 Score = 91.5 bits (100), Expect = 3e-13 Identities = 122/167 (73%), Gaps = 2/167 (1%) Strand=Plus/Plus Query 297429 TCAGTTTTGTGAAAATATATCGTGCACTCGCGTGATCCTTACCACCCTGCAATCTCGAAC 297488 ||| ||| || |||||||| || | ||| ||| ||| || || || || || | || || Sbjct 34973 TCAATTTGGTAAAAATATAACGCGGACTAGCGGCATCTTTGCCGCCTTGTAAACGCGTAC 35032 Query 297489 CGAACTGGCCCTCCGGCAACAACCAGTTGATGTTATTGCTTCCGACATAATCCTGTGCAA 297548 |||| || || | ||||| |||| |||| ||||| ||||||||||| ||| ||| || | Sbjct 35033 CGAATTGACCATTCGGCATCAACAAGTTTATGTTGTTGCTTCCGACGAAATTCTGCGCTA 35092 Query 297549 GGTTCACGATGGTC-CCTTGCAGAGATGCTTCGCCATGGTGATAGGC 297594 || | ||||||| | || || || |||||| || ||||| || Sbjct 35093 AATTTATGATGGTCGACATG-AGCGACATTTCGCCGTGATGATAAGC 35138 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102697870052150