Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Maconellicoccus_20hirsutus_20[genbank_20GCA_5F900064465.1_202016-03- 26] 12,889 sequences; 163,044,544 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq11206 82.4 6e-11 >seq11206 Length=79130 Score = 82.4 bits (90), Expect = 6e-11 Identities = 97/131 (74%), Gaps = 3/131 (2%) Strand=Plus/Minus Query 108886 CTCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGACTACAAGGCCGCCGAG 108945 || ||||| || |||||||||||||||||||| ||||||| |||||||| || ||||| Sbjct 16390 CTAGGCGAAGGTTGGCACAACTACCACCACGTCTTCCCCTGGGACTACAAAGCGGCCGAA 16331 Query 108946 TTGGGGAACGA---CTTTAATTTCACCGCTAGGATATTGGACTTTGCCGCGTCGAGAGGA 109002 ||||| || | ||||| | ||||||| | |||||| | || | |||| Sbjct 16330 TTGGGAAATTATACGTTTAACGTTACCGCTATGTGGTTGGACCTATTTGCTAAAATAGGA 16271 Query 109003 TGGGTCTACGA 109013 |||| |||||| Sbjct 16270 TGGGCCTACGA 16260 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381712829339016