Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Maconellicoccus_20hirsutus_20[genbank_20GCA_5F900064465.1_202016-03- 26] 12,889 sequences; 163,044,544 total letters Query= NC_011588.1 Length=127615 Score E Sequences producing significant alignments: (Bits) Value seq8663 84.2 2e-11 >seq8663 Length=34281 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/194 (70%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 69537 TATGTGTTTTTCTTTTACCGAGAAGTGGCCGTCGAGCATATTAACTGCGGAAAGACCATT 69596 || ||||||||||| | || ||| ||| ||||| |||| |||||||| || | | | Sbjct 11771 TACGTGTTTTTCTTCTTTCGCGAAACGGCGGTCGAATATATCAACTGCGGTAAAAGCGTG 11712 Query 69597 TATTCGAGAGTCGCTCGTGTCTGCAAAAATGATCACGGCGGC--CCACATCGGTACTCGG 69654 || ||||| || |||||| | ||||| | ||| ||||||| | ||| | || Sbjct 11711 TACTCGAGGGTGGCTCGTATTTGCAAGAGGGATACCGGCGGCAAGAATATCCTCAGTC-- 11654 Query 69655 ATAAATGGACGTCATTTTTAAAGACTCGACTAAATTGTTCGGTGCCCGGCGAATTCCCCT 69714 | || ||| || | | ||| || ||||||| || || ||| | || || ||||| || | Sbjct 11653 AGAATTGGGCGACGTATTTGAAAGCTCGACTGAACTGCTCGATACCGGGAGAATTTCCGT 11594 Query 69715 TTTACTTTGACGAA 69728 |||| || ||||| Sbjct 11593 TTTATTTCAACGAA 11580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408179071244504