Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Maconellicoccus_20hirsutus_20[genbank_20GCA_5F900064465.1_202016-03- 26] 12,889 sequences; 163,044,544 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq4389 102 1e-16 >seq4389 Length=72474 Score = 102 bits (112), Expect = 1e-16 Identities = 106/139 (76%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 159632 AGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAAACCATGTGACT 159691 |||||||| | |||||||||||| | ||||| || || ||||| |||| |||| Sbjct 20353 AGGTATATTTAGATGGTGCAAATATGAATGCTCAAGTGGGTCTTTGTCGACCAGCAGACT 20294 Query 159692 ATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCACATGGAGGTG 159751 ||||| |||| || | |||| | ||||| ||||| ||||| ||||| || |||||||| | Sbjct 20293 ATGGTTCAGACGTTTCTCATTTGAACTTGCATAAAACATTTTGTATACCTCATGGAGGAG 20234 Query 159752 GAGGTCCTGGCGTAGGTCC 159770 | ||||| || || || || Sbjct 20233 GTGGTCCAGGAGTTGGACC 20215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587956457601040