Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Maconellicoccus_20hirsutus_20[genbank_20GCA_5F900064465.1_202016-03- 26] 12,889 sequences; 163,044,544 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq1074 179 3e-39 seq5490 174 1e-37 seq5713 159 3e-33 seq4379 159 3e-33 seq3068 138 9e-27 seq12829 118 9e-21 seq11905 105 5e-17 seq9601 105 5e-17 seq9555 105 5e-17 seq9384 98.7 8e-15 seq11116 95.1 1e-13 seq11230 93.3 3e-13 seq4747 86.0 5e-11 >seq1074 Length=75773 Score = 179 bits (198), Expect = 3e-39 Identities = 370/549 (67%), Gaps = 6/549 (1%) Strand=Plus/Minus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 ||| || ||||| || || || || || || || ||||| |||||||| | || || Sbjct 48752 AGCAATTGGTATTGACTTGGGTACTACTTACTCCTGCGTTGGAGTTTGGCAGCAAGGAAA 48693 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 ||| ||||| || ||||| || || ||||||||||| |||||| ||||||| | || || Sbjct 48692 AGTGGAAATAATCGCCAACGACCAGGGTAACAGAACCACTCCAAGTTATGTTGCGTTTAC 48633 Query 550111 GGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAA 550170 ||| |||||| | |||| || || || || |||| | || ||||| | || Sbjct 48632 CGAATCTGAACGGCTTATTGGAGACGCGGCCAAGAATCAGGTAGCTTTGAATCCGAAGAA 48573 Query 550171 TACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGC 550230 || | || || || ||||| ||||| || | | | | | ||| | | |||| Sbjct 48572 CACCGTATTCGACGCGAAACGATTAATCGGCCGTAAATATGACGATCCTAAAATTCAACA 48513 Query 550231 AGATATGAAGCATTGGCCTTTCCAAATTGTTA---ATGTTTCTGGAAAACCTTATATTGA 550287 ||| ||||| |||||||| ||| | ||| | ||| | ||| ||||| | ||| | Sbjct 48512 AGACATGAAACATTGGCCGTTC---ACTGTAACAAATGACTATGGTAAACCGAAAATTCA 48456 Query 550288 AGCTACTCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTT 550347 || | |||| ||| || | |||||| |||| || ||||| || Sbjct 48455 AGTAGAATTTAAAGGCGAACGTAAGATCTTCGCTCCAGAAGAAATCAGTTCAATGGTGTT 48396 Query 550348 AATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAAT 550407 | ||||||||| ||| |||| || | | | || |||| | || || || || Sbjct 48395 GACTAAAATGAAAGAAATAGCCGAAGCATATTTAGGATGTCAAGTCAAAGACGCCGTCAT 48336 Query 550408 AACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTAT 550467 || || || |||||||| ||||| || ||| | |||||||| ||||| || ||| ||| Sbjct 48335 CACAGTTCCTGCATATTTCAATGATTCTCAAAGGCAAGCTACCAAAGACGCCGGAGCTAT 48276 Query 550468 TGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGG 550527 |||||||||||||| | ||||| ||||| ||||| || || || || | || || || Sbjct 48275 AGCTGGACTTAATGTATTGCGTATCATCAACGAACCAACAGCAGCAGCGTTAGCCTACGG 48216 Query 550528 ACTTGATAA 550536 || ||||| Sbjct 48215 TCTCGATAA 48207 >seq5490 Length=11175 Score = 174 bits (192), Expect = 1e-37 Identities = 348/513 (68%), Gaps = 2/513 (0%) Strand=Plus/Plus Query 550025 TGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAAATTATTGCCAATGATCAAGGTAACAGA 550084 || ||||| ||||||||| | || |||||||| || || |||||||||||||| || || Sbjct 514 TGCGTTGGAGTTTGGCAACAAGGAAAAGTTGAGATCATCGCCAATGATCAAGGAAATCGA 573 Query 550085 ACTACTCCATCTTATGTTTCTTTCACGGAAACTGAACATTTAGTTGGTGATGCAGCAAAA 550144 || || || ||||| | ||||| || || |||| ||| | || || ||||| ||| Sbjct 574 ACAACACCTAGCTATGTGGCATTCACCGATACCGAACGTTTGATAGGAGACGCAGCCAAA 633 Query 550145 TATCAAGCCACTGGTAATCCTACCAATACTATTTTTGATGCTAAACGTTTAATTGGAAGA 550204 |||| | | | || || | || || |||| |||||||||||||| || || | Sbjct 634 AATCAGGTCGCGTTGAACCCGAAAAACACAGTTTTCGATGCTAAACGTTTGATCGGTCGC 693 Query 550205 AGTTTTAATGATTCGACTGTTCAGGCAGATATGAAGCATTGGCCTTTCCAAATTGTTAAT 550264 | | ||||| ||| | ||| ||| ||||| || ||||| ||| | || ||| Sbjct 694 AAATACGATGATCCGAAGATCCAGCAAGACATGAAACACTGGCCGTTCACCGTCGTCAAT 753 Query 550265 GTTTCTGGAAAACCTTATATTGAAG-CTACTCATGAAGGATCTGTTAAACAATTTTCACC 550323 | || ||||| | ||| ||| | | | | |||| ||| ||| | || Sbjct 754 GATTACTCTAAACCGAAAATTCAAGTCGAGT-TTAAAGGTGAAAAGAAAGTATTCGCGCC 812 Query 550324 AGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGG 550383 ||| |||| || ||||||||||| || |||||| |||||||| | | | | || Sbjct 813 GGAAGAAATAAGCTCGATGGTTTTAATCAAGATGAAAGAAACAGCCGAAACATATCTCGG 872 Query 550384 TCAAGAAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCA 550443 |||| || ||||| || || || ||||| || || || || || || ||| | || Sbjct 873 AGGTAAAGTAACAGATGCCGTTATCACAGTACCTGCTTACTTCAACGATTCCCAAAGACA 932 Query 550444 AGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACC 550503 ||| || |||||||| || || |||||| | |||||| | ||||| || || ||||| Sbjct 933 AGCCACCAAAGATGCCGGTGCCATCGCTGGATTGAATGTTTTGCGTATCATAAACGAACC 992 Query 550504 TACTGCTGCTGCACTTGCATATGGACTTGATAA 550536 ||||| || || | || || || || || || Sbjct 993 CACTGCCGCCGCTTTGGCTTACGGTCTCGACAA 1025 >seq5713 Length=114977 Score = 159 bits (176), Expect = 3e-33 Identities = 165/216 (76%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 563260 CGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAA 563319 |||||||| | ||| | || |||||| |||||| ||||| | ||||||||| | Sbjct 41445 CGGAGTACCAAATGTAAAGTCGATTCTTTTTGAATATTATAATCGGAGAGAGTTCTTCCA 41386 Query 563320 TCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTA 563379 ||||| |||||||| ||||| || || || | ||||||||| || ||||||||||||||| Sbjct 41385 TCTTCTAGTTGTTTGCCGGCGAAGATGAGACGTTGCTGATCTGGGGGAATTCCTTCTTTA 41326 Query 563380 TCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTAACA 563439 ||||||||||| ||| || ||| || ||||| || | |||||| |||| | Sbjct 41325 TCTTGAATTTTAGCTTTCACATTCTCGATGGTATCGCTGGGTTCGACTTCGAGCGTAATA 41266 Query 563440 GTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 ||||||||||| | ||||| ||||| ||||||||| Sbjct 41265 GTTTTACCAGTTAATGTTTTGACGAAGATTTGCATA 41230 Score = 156 bits (172), Expect = 3e-32 Identities = 149/190 (78%), Gaps = 2/190 (1%) Strand=Plus/Minus Query 563286 TTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAAT 563345 ||||| ||||| ||||| | ||||||||| |||||| |||||||| ||||| || || Sbjct 41189 TTTGG--ATATTATAATCGGAGAGAGTTCTTCCATCTTCTAGTTGTTTGCCGGCGAAGAT 41132 Query 563346 AAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTC 563405 || | ||||||||| || |||||||| ||||||||||||||||| ||| || || Sbjct 41131 GAGACGTTGCTGATCTGGGGGAATTCCCTCTTTATCTTGAATTTTGGCTTTAACGTTTTC 41072 Query 563406 AATTGTATCAGTGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAA 563465 ||| ||||| || | |||||| |||| |||||||||||| | |||||||||||| Sbjct 41071 AATGGTATCGCTGGGTTCGACTTCGAGCGTAATAGTTTTACCAGTCAAAGTTTTAACGAA 41012 Query 563466 AATTTGCATA 563475 ||| |||||| Sbjct 41011 AATCTGCATA 41002 Score = 140 bits (154), Expect = 3e-27 Identities = 162/216 (75%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 563260 CGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAA 563319 |||||||| | ||| | || |||||| ||||||||||| | ||||||||| | Sbjct 40989 CGGAGTACCAAATGTAAAGTCGATTCTTTTTGGATATTGTAATCGGAAAGAGTTCTTCCA 40930 Query 563320 TCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTA 563379 ||||| | |||||| || || || || || | ||||||||| || ||||||||||| ||| Sbjct 40929 TCTTCCAATTGTTTACCAGCGAAGATGAGACGTTGCTGATCTGGGGGAATTCCTTCCTTA 40870 Query 563380 TCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGTAAC 563438 ||||||||||| |||||| ||| || ||||| | || | | |||||| || | Sbjct 40869 TCTTGAATTTTGGCTTTTACATTCTCGATGGTATC-GCTTGGTTCGACTTCGAGCGTGAT 40811 Query 563439 AGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 ||||||||||| | |||||| ||||| || ||||| Sbjct 40810 GGTTTTACCAGTCAAAGTTTTGACGAAGATCTGCAT 40775 Score = 132 bits (146), Expect = 4e-25 Identities = 144/190 (76%), Gaps = 2/190 (1%) Strand=Plus/Minus Query 563286 TTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAAT 563345 ||||| ||||| ||||||| ||||||||| ||||| | |||||| || || || || Sbjct 41645 TTTGG--ATATTATAATCAGAGAGAGTTCTTCCGTCTTCTAATTGTTTACCAGCGAAGAT 41588 Query 563346 AAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTC 563405 || | ||| ||||| || ||||||||||| |||||||||||||| ||| || ||| Sbjct 41587 GAGACGTTGTTGATCTGGGGGAATTCCTTCCTTATCTTGAATTTTAGCTTTCACGTTCTC 41528 Query 563406 AATTGTATCAGTGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAA 563465 || ||||| || | |||||| |||| |||||||||||| | ||||| ||||| Sbjct 41527 GATGGTATCGCTGGGTTCGACTTCGAGCGTAATAGTTTTACCAGTTAATGTTTTGACGAA 41468 Query 563466 AATTTGCATA 563475 ||||||||| Sbjct 41467 GATTTGCATA 41458 >seq4379 Length=409 Score = 159 bits (176), Expect = 3e-33 Identities = 165/216 (76%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 563260 CGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAA 563319 |||||||| | ||| | || |||||| |||||| ||||| | ||||||||| | Sbjct 230 CGGAGTACCAAATGTAAAGTCGATTCTTTTTGAATATTATAATCGGAGAGAGTTCTTCCA 171 Query 563320 TCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTA 563379 ||||| |||||||| ||||| || || || | ||||||||| || ||||||||||||||| Sbjct 170 TCTTCTAGTTGTTTGCCGGCGAAGATGAGACGTTGCTGATCTGGGGGAATTCCTTCTTTA 111 Query 563380 TCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTAACA 563439 ||||||||||| ||| || ||| || ||||| || | |||||| |||| | Sbjct 110 TCTTGAATTTTAGCTTTCACATTCTCGATGGTATCGCTGGGTTCGACTTCGAGCGTAATA 51 Query 563440 GTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 ||||||||||| | ||||| ||||| ||||||||| Sbjct 50 GTTTTACCAGTTAATGTTTTGACGAAGATTTGCATA 15 Score = 125 bits (138), Expect = 6e-23 Identities = 129/166 (78%), Gaps = 2/166 (1%) Strand=Plus/Minus Query 563311 GTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATT 563370 |||||| |||||| | |||||| || || || || || | ||||||||| || |||||| Sbjct 407 GTTCTTCCATCTTCCAATTGTTTACCAGCGAAGATGAGACGTTGCTGATCTGGGGGAATT 348 Query 563371 CCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTC 563429 ||||| |||||||||||||| |||||| ||| || ||||| | || | | ||| Sbjct 347 CCTTCCTTATCTTGAATTTTGGCTTTTACATTCTCGATGGTATC-GCTTGGTTCGACTTC 289 Query 563430 GAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 ||| |||| |||||||||||| | ||||| ||||| ||||||||| Sbjct 288 GAGCGTAATAGTTTTACCAGTTAATGTTTTGACGAAGATTTGCATA 243 >seq3068 Length=176317 Score = 138 bits (152), Expect = 9e-27 Identities = 517/798 (65%), Gaps = 26/798 (3%) Strand=Plus/Plus Query 551790 GGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGT--ATCATGGTGTGTTG 551847 |||||| |||| | || || |||||||| ||||| ||| |||| ||||| ||| Sbjct 149957 GGAGATACTCACTTGGGAGGTGAAGATTTCGATAACAGAATGGTCAATCATTTCGTGC-- 150014 Query 551848 AAGATTTTAAACGAAAAAACAA-----AGTTGATCTATCTACATCTGCCAAAGCTCTTCG 551902 |||| || || || || |||| | |||| | ||| | |||||| || Sbjct 150015 AAGAATTCAAGCGCAAGTACAAGAAAGACTTGACGCAAA-ACAAACG----AGCTCTACG 150069 Query 551903 TCGTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCAC 551962 |||| || | || |||||||||||||| || || | | || ||| ||| ||| ||| Sbjct 150070 TCGTTTACGCACCGCTTGCGAAAGAGCAAAGAGAACCTTATCGTCTTCTACGCAAGCCAG 150129 Query 551963 TATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAA 552022 || ||| | ||||| |||| || || || |||| | | || | ||| | | ||| Sbjct 150130 CATCGAAATTGATTCGTTATACGAAGGCATCGATTTTTACACATCCATTACTCGTGCCCG 150189 Query 552023 ATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTT 552082 || ||||| | | ||| | || | | || || |||||||| || || | Sbjct 150190 TTTCGAAGAATTGAACGCCGATTTGTTCCGTAGCACGATGGAACCAGTTGAGAAATCCAT 150249 Query 552083 AAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTAC 552142 | ||| | || || || ||| | || | || || || || | || ||||| || || Sbjct 150250 CCGCGATGCTAAAATGGACAAAGCTCAAATCCACGACATCGTATTGGTAGGTGGTTCGAC 150309 Query 552143 AAGAATTCCTAAAATTCGCGAAATGTT--AAGTTCTTATTTCAATGGTAAAAAATTAAAT 552200 | || |||||| | | || | || ||| | | ||||| || ||| ||||||| Sbjct 150310 GCGTATCCCTAAAGTACAAAAATTATTGCAAGATTTC--TTCAACGGAAAAGAATTAAAC 150367 Query 552201 GAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTT 552260 || | ||||| ||||| ||||| || |||||||| || | ||||| || || ||| Sbjct 150368 AAATCGATCAATCCCGATGAAGCTGTCGCATATGGTGCTGCCGTACAAGCCGCCAT-CTT 150426 Query 552261 TCT-GGACAAACTGATGAAAAACTACAAAATAT--TGTACTTGTAGATGTTACTCCTCTA 552317 | || | | ||| || | ||| || | ||| ||| || || || || || Sbjct 150427 ACACGGTGATAAGTCGGAAGAAGTTCAAGATCTGTTGTTATTG--GACGTAACACCGTTA 150484 Query 552318 TCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACT 552377 || | ||| | ||||| | || ||| |||||||| | ||| | | || || || Sbjct 150485 TCGTTGGGTATTGAAACCGCCGGCGGTGTTATGACTGTATTGATCAAACGTAACACCACC 150544 Query 552378 ATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACA 552437 ||||| ||| || | | || |||| || || || || ||| | | ||| Sbjct 150545 ATTCCGACCAAACAAACGCAAACCTTCACTACATACTCGGACAACCAACCCGGTGTATTG 150604 Query 552438 ATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTT 552497 || ||| | | ||||| ||| | | || || |||||||| |||||||| || Sbjct 150605 ATCCAAGTATACGAAGGCGAACGTGCCATGACCAAGGATAATAACTTACTTGGTAAATTC 150664 Query 552498 -AATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGA 552556 || ||| ||||||||||| || |||||||| ||||| || || || |||||||| || Sbjct 150665 GAACTTACC-GGTATTCCTCCGGCGCCTCGTGGCGTACCTCAGATCGAGGTTACTTTTGA 150723 Query 552557 TATCGATGCCAATGGAAT 552574 |||||| ||||| || || Sbjct 150724 TATCGACGCCAACGGTAT 150741 Score = 136 bits (150), Expect = 3e-26 Identities = 147/192 (77%), Gaps = 6/192 (3%) Strand=Plus/Plus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 ||| || ||||| ||||| || || || || || |||||||| | ||| | ||||| Sbjct 148535 AGCAATTGGTATTGATTTGGGTACTACGTACTCGTGCGTTGGTGTATTCCAACACGGTAA 148594 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 ||| |||||||| ||||| |||||||||||||| || |||||| ||||||| | ||||| Sbjct 148595 AGTCGAAATTATCGCCAACGATCAAGGTAACAGGACGACTCCAAGTTATGTTGCCTTCAC 148654 Query 550111 GGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCA---AGCCACTGGTAATCCTAC 550167 || || |||| |||| | || ||||| || ||| |||| ||||| || ||||||| Sbjct 148655 CGATACGGAACGTTTAATCGGCGATGCTGCTAAAAATCAAGTAGCCA-TG--AATCCTAA 148711 Query 550168 CAATACTATTTT 550179 ||| || ||||| Sbjct 148712 CAACACCATTTT 148723 Score = 102 bits (112), Expect = 7e-16 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 550331 ATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAA 550390 ||||| || ||||| || | ||||||||| | || ||| || | | ||| || Sbjct 149140 ATTTCCTCAATGGTCTTGACCAAAATGAAAGAGACTGCCGAAGCGTACTTGGGTAAAACC 149199 Query 550391 GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACT 550450 || || | || ||||| ||||| || || |||||||| || || ||| | || || || Sbjct 149200 GTCACAAACGCTGTAATTACTGTTCCTGCCTATTTTAACGATTCTCAAAGACAGGCCACA 149259 Query 550451 AAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCT 550510 |||||||| || ||| | ||| | ||||| | |||||||| || |||||||||||| Sbjct 149260 AAAGATGCCGGTACCATTTCCGGATTAAATGTATTACGTATTATTAACGAACCTACTGCT 149319 Query 550511 GCTGCACTTGCATATGGACTTGATAA 550536 || || |||| || || | ||||| Sbjct 149320 GCCGCCATTGCCTACGGTTTAGATAA 149345 >seq12829 Length=36573 Score = 118 bits (130), Expect = 9e-21 Identities = 136/183 (74%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 563292 AATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCT 563351 |||||| ||||| | || ||| | ||| || || ||||||||||||||||| | | Sbjct 35476 AATATTATAATCTGATAAAGTACGCCCATCCTCTAGCTGTTTTCCGGCAAAAATCAAACG 35417 Query 563352 TTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGT 563411 || ||||| |||||||| |||||||||||||||||||| ||||| || || |||| Sbjct 35416 CTGTTGATCTGGAGGAATCCCTTCTTTATCTTGAATTTTCTGTTTCACATTTTCTATTGA 35357 Query 563412 ATCAGTGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTG 563471 ||||| | | ||| | ||| | |||||||| || || ||||| || || ||||| Sbjct 35356 ATCAGAAGGTTCAACTTCCAAAGTTATTGTTTTACCGGTGAGCGTTTTTACAAAGATTTG 35297 Query 563472 CAT 563474 ||| Sbjct 35296 CAT 35294 >seq11905 Length=336 Score = 105 bits (116), Expect = 5e-17 Identities = 157/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGA-GTTCT 563315 ||||| | || | ||||||||| |||||| || ||||| || ||| | ||||| Sbjct 96 AGACGTAACACCAAATGAAGGGTGGATTCTTTTTGGATGTTGTAGTC-GCTCAACGTTCT 154 Query 563316 TGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTC 563375 | ||||| ||||| |||||||| || || | |||||| || || || || || ||||| Sbjct 155 TCCGTCTTCGAGTTGCTTTCCGGCGAAGATCAATCTTTGTTGGTCGGGTGGGATACCTTC 214 Query 563376 TTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGT 563435 ||| ||||| ||||| ||| || || ||||| || | | | ||| | ||| Sbjct 215 TTTGTCTTGGATTTTAGCTTTGACGTTTTCGATTGTGTCGGACGGCTCAACTTCTAAAGT 274 Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 | ||||| || || |||||||| ||||||||||||||| Sbjct 275 TATCGTTTTTCCGGTGAGAGTTTTCACGAAAATTTGCATA 314 >seq9601 Length=294 Score = 105 bits (116), Expect = 5e-17 Identities = 157/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGA-GTTCT 563315 ||||| | ||| | |||||||| |||||| || ||||| || ||| | ||||| Sbjct 54 AGACGTAATACTAAGTGAAGGGTGGATTCTTTTTGGATGTTGTAGTC-GCTCAACGTTCT 112 Query 563316 TGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTC 563375 | ||||| ||||| |||||||| || || | |||||| || || || || || ||||| Sbjct 113 TCCGTCTTCGAGTTGCTTTCCGGCGAAGATCAATCTTTGTTGGTCGGGTGGGATCCCTTC 172 Query 563376 TTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGT 563435 ||| ||||| ||||| ||| || || ||||| || | | | ||| | ||| Sbjct 173 TTTGTCTTGGATTTTAGCTTTGACGTTTTCGATTGTGTCGGACGGCTCAACTTCTAAAGT 232 Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 | ||||| || || |||||||| ||||||||||||||| Sbjct 233 TATCGTTTTTCCGGTGAGAGTTTTCACGAAAATTTGCATA 272 >seq9555 Length=64705 Score = 105 bits (116), Expect = 5e-17 Identities = 157/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGA-GTTCT 563315 ||||| | ||| | |||||||| |||||| || ||||| || ||| | ||||| Sbjct 30754 AGACGTAATACTAAGTGAAGGGTGGATTCTTTTTGGATGTTGTAGTC-GCTCAACGTTCT 30696 Query 563316 TGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTC 563375 | ||||| ||||| |||||||| || || | |||||| || || || || || ||||| Sbjct 30695 TCCGTCTTCGAGTTGCTTTCCGGCGAAGATCAATCTTTGTTGGTCGGGTGGGATCCCTTC 30636 Query 563376 TTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGT 563435 ||| ||||| ||||| ||| || || ||||| || | | | ||| | ||| Sbjct 30635 TTTGTCTTGGATTTTAGCTTTGACGTTTTCGATTGTGTCGGACGGCTCAACTTCTAAAGT 30576 Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 | ||||| || || |||||||| ||||||||||||||| Sbjct 30575 TATCGTTTTTCCGGTGAGAGTTTTCACGAAAATTTGCATA 30536 >seq9384 Length=707 Score = 98.7 bits (108), Expect = 8e-15 Identities = 101/132 (77%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 552447 TTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAA 552506 || |||||||||||| | | || |||||||| | | || || | || |||| Sbjct 167 TTCGAAGGAGAAAGACCAATGACGAAAGATAACCACCCTCTGGGCAAATTCGATTTGACC 108 Query 552507 GGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCC 552566 ||||||||||||||||||||||| || || ||||||||||| || ||||| ||||| || Sbjct 107 GGTATTCCTCCTGCTCCTCGTGGTGTTCCACAAATTGAAGTAACCTTCGAAATCGACGCG 48 Query 552567 AATGGAATTTTG 552578 || || |||||| Sbjct 47 AACGGTATTTTG 36 >seq11116 Length=705 Score = 95.1 bits (104), Expect = 1e-13 Identities = 100/132 (76%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 552447 TTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAA 552506 || |||||||||||| | | || |||||||| | | | || | || |||| Sbjct 167 TTCGAAGGAGAAAGACCAATGACGAAAGATAACCACCCTTTGGGCAAATTCGATTTGACC 108 Query 552507 GGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCC 552566 ||||||||||||||||||||||| || || ||||||||||| || ||||| ||||| || Sbjct 107 GGTATTCCTCCTGCTCCTCGTGGTGTTCCACAAATTGAAGTAACCTTCGAAATCGACGCG 48 Query 552567 AATGGAATTTTG 552578 || || |||||| Sbjct 47 AACGGTATTTTG 36 >seq11230 Length=416 Score = 93.3 bits (102), Expect = 3e-13 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 ||||| | || | ||||||||| |||||| ||||||||| ||| | ||||| Sbjct 302 AGACGTAACACCAAATGAAGGGTGGATTCTTTCTGAATATTGTAGTCACTCAACGTTCTG 243 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 |||||| | ||||||||||| || || | |||||| || || || || || |||||| Sbjct 242 CCATCTTCCAACTGTTTTCCGGCGAAGATCAATCTTTGTTGGTCGGGTGGGATGCCTTCT 183 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTA 563436 || ||||| || || || || || ||||| || | | ||| | ||| Sbjct 182 TTGTCTTGGATCTTAGCCTTGACGTTTTCGATTGTGTCGGACGGCTCGACTTCCAAAGTG 123 Query 563437 ACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 | ||||| || || || ||||| ||||||||||||||| Sbjct 122 ATCGTTTTTCCGGTGAGCGTTTTCACGAAAATTTGCATA 84 >seq4747 Length=40447 Score = 86.0 bits (94), Expect = 5e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 552507 GGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCC 552566 ||||||||||||||||||||||| || || ||||||||||| || ||||| ||||| || Sbjct 39061 GGTATTCCTCCTGCTCCTCGTGGTGTTCCACAAATTGAAGTAACCTTCGAAATCGACGCG 39120 Query 552567 AATGGAATTTTG 552578 || || |||||| Sbjct 39121 AACGGTATTTTG 39132 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4028614371550610