Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Maconellicoccus_20hirsutus_20[genbank_20GCA_5F900064465.1_202016-03- 26] 12,889 sequences; 163,044,544 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq6746 109 3e-19 >seq6746 Length=106662 Score = 109 bits (120), Expect = 3e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 25943 TCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTC 26002 || |||||||| | || |||||||||||| ||| ||||| || ||| |||| Sbjct 29596 TCAGGAATCCATAGAGCGATAAATAAATCTCTACATCTATACTCTTCGTTACCGGAATTC 29537 Query 26003 TTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAA 26062 | || ||||| || || |||||||| | ||||| |||||||||||||| || ||| Sbjct 29536 ATCCGTAATTCTAAAAACTCGAAAATATCCGTATGCCAGGGTTCTAAATAGATGGCGAAA 29477 Query 26063 CTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTC 26122 ||| |||||| || |||||||| |||||||| ||||| | |||| | |||| Sbjct 29476 GCGCCTGGTCTTTTGTTGCCTCCTTGATCGACGTATCTCGCAGTGTAATTGTAGACTTGA 29417 Query 26123 AACATTGGAACTAATCCAGTTGA 26145 | ||| ||||| | ||| |||| Sbjct 29416 AGCATAGGAACAAGACCATTTGA 29394 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253000251290675