Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Maconellicoccus_20hirsutus_20[genbank_20GCA_5F900064465.1_202016-03- 26] 12,889 sequences; 163,044,544 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq6746 82.4 7e-11 >seq6746 Length=106662 Score = 82.4 bits (90), Expect = 7e-11 Identities = 90/120 (75%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 6619 ATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCC 6678 |||||||||||| || ||||||| | |||||| || || ||||| || || |||| || Sbjct 3798 ATGAGCGATCATATAAGTGAGCAAGGAGTAACTTGCTATATTGAAAGGTACACCTAGACC 3857 Query 6679 CATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTG 6738 ||| || | || |||||||| | | || || ||||| ||||| || || || ||||| Sbjct 3858 CATATCAGCAGAGCGTTGATACATGAGACACGAAAGCTCACCATTAGCTACATAAAATTG 3917 Score = 82.4 bits (90), Expect = 7e-11 Identities = 90/120 (75%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 34607 CAATTCTACGTCGCGAATGGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATG 34666 ||||| || || || ||||| ||||| || || | | |||||||| || | || ||| Sbjct 3917 CAATTTTATGTAGCTAATGGTGAGCTTTCGTGTCTCATGTATCAACGCTCTGCTGATATG 3858 Query 34667 GGGTTAGGGGTGCCGTTCAACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCAT 34726 || |||| || || ||||| || || |||||| | ||||||| || |||||||||||| Sbjct 3857 GGTCTAGGTGTACCTTTCAATATAGCAAGTTACTCCTTGCTCACTTATATGATCGCTCAT 3798 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448190179324080