Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocentrus_20cingulum_20[genbank_20GCA_5F002156465.1_202017-05-22] 12,056 sequences; 127,916,415 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq1257 91.5 2e-13 seq1868 89.7 5e-13 >seq1257 Length=117934 Score = 91.5 bits (100), Expect = 2e-13 Identities = 159/231 (69%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 15998 GAAAATAT----CTTAGAGTACCCCAGTTCCGTAACTAATCTATCTGCTACAAATTCTAT 16053 |||||||| ||||||| | || |||||| | | |||||||| || |||||||| || Sbjct 89892 GAAAATATTTACCTTAGAGCAGCCGAGTTCCATGAGCAATCTATCAGCCACAAATTCAAT 89833 Query 16054 ATATTGACACATTAAGTCGCAATTAATTCCTATAAGTCGTACCGGAAGAGCTTTTGTTAA 16113 ||||||||||| | ||||| || || || | | || || ||||| | || | Sbjct 89832 GTATTGACACATCAGTGTACAATTCATACCAATCATTTTAACGGGCAGAGCGTCAGTGAG 89773 Query 16114 AAATTGTTGTTCTATCACAACCGCTTCTTTAATGATATCGGTGGCTCGTGTTTCAGACGG 16173 ||||| || || || |||| || || || ||||| || ||||| | || || Sbjct 89772 AAATTCCTGCTCGATTGCAACGGCGTCCTTGATGATTGTAGTCACTCGTTCCTTTGATGG 89713 Query 16174 TGTATGGTTTAGGTGTTTAAACATTAGACACGCGAAGTCGCAATGTAGTCC 16224 | | ||| | | |||||| ||||| | || || ||||| || |||| ||| Sbjct 89712 TTTTTGGATGATGTGTTTGAACATCAAGCAGGCAAAGTCACAGTGTAATCC 89662 >seq1868 Length=114019 Score = 89.7 bits (98), Expect = 5e-13 Identities = 188/273 (69%), Gaps = 8/273 (3%) Strand=Plus/Plus Query 118936 TTCATGTATCGTATCTTTCCAAATACGGTACGCTCCTTCCATGCTCTGTCGTGGAGTCCT 118995 ||||||||||| ||||| ||||| | ||||||||||| | ||||||||| || Sbjct 69442 TTCATGTATCGAATCTTGCCAAAAATCTCTCGCTCCTTCCAGCCCATGTCGTGGATGCCA 69501 Query 118996 GCTACTGCCCATAGACATCCCACGTATCCGTTGGGATCTGTTCCGTCTA-ACTCGTACTT 119054 | || ||| | || || |||||||| || ||||| | || || | ||| |||||| Sbjct 69502 CAAATTGACCACATGCAGCCTACGTATCCATTTGGATCCCTGCCATCCATACT-GTACTT 69560 Query 119055 ATCGTTTAAGTAGA-TACAGACGCTTAACGCACTTTCCGGAGTCTTACTCCATTCCAGTA 119113 ||||| | ||| | | | | || || || || ||||| || ||| || || | Sbjct 69561 GTCGTTGAGGTAAATTGCCGTTGC-CAAGGCCTCCTCGGGAGTTTTTGACCACTCGAGAA 69619 Query 119114 tttttttAGCCCAGTACATACGTAAATACCCGTGCATTTTACCCTCGTTAATCATCTGAA 119173 ||||||| ||||| ||||| || | | ||||||||||| || || | || ||| Sbjct 69620 TTTTTTTCGCCCAATACATGCGCATGAAACCGTGCATTTTGCCTTCTCGCACCAGCTG-- 69677 Query 119174 GTTGTGCG--GTGTTCCATAGAGGATCGTGTGT 119204 ||| |||| | |||||| ||| ||||| || Sbjct 69678 GTTCTGCGCCGCGTTCCAGAGATCCTCGTGCGT 69710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511337329849920