Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocentrus_20cingulum_20[genbank_20GCA_5F002156465.1_202017-05-22] 12,056 sequences; 127,916,415 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq11508 109 4e-19 seq2569 91.5 1e-13 seq1005 86.0 4e-12 >seq11508 Length=54009 Score = 109 bits (120), Expect = 4e-19 Identities = 141/192 (73%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 ||||| || ||||||||||| ||||| | | |||| || | |||||| || |||||| Sbjct 27647 TCTTTTTGGATGTTGTAGTCCGACAGGGTTCTGCCGTCCTCGAGCTGCTTTCCGGCGAAA 27706 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATC 34317 || || ||||||||||| || | || |||||||| ||| || ||||| | || Sbjct 27707 ATCAGTCGCTGCTGGTCTGGTGGGATGCCTTCCTTGTCCTGGATC-TTAGCTTTGACATT 27765 Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 | || | |||| | || || |||| |||||||| ||||| ||||| ||||| || Sbjct 27766 CTCGATTGTGTCGGAAGCCTCAACTTCCAGAGTGATGGTCTTGCCCGTGAGGGTTTTGAC 27825 Query 34378 AAAGATCTGCAT 34389 |||||||||||| Sbjct 27826 AAAGATCTGCAT 27837 Score = 104 bits (114), Expect = 2e-17 Identities = 140/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| |||||||||||||| || ||| |||| || | |||||| || || || Sbjct 27875 TCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAAG 27934 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 || || ||||| || || || | || |||||||| |||||| ||| | | Sbjct 27935 ATCAGTCGCTGTTGATCCGGTGGGATGCCTTCCTTGTCCTGGATCTTTGCCTTGACGTTC 27994 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | |||| || | || ||||| || | |||||||| || ||||||||||||||||| Sbjct 27995 TCAATCGTGTCCGACGCCTCGACCTCAAGGGTGATGGTCTTCCCGGTGAGAGTTTTCACG 28054 Query 34379 AAGATCTGCATCGCT 34393 || |||||||| ||| Sbjct 28055 AAAATCTGCATTGCT 28069 Score = 96.9 bits (106), Expect = 2e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 ||||| || ||||||||||| ||||| | | |||| || | |||||| || |||||| Sbjct 27191 TCTTTTTGGATGTTGTAGTCCGACAGGGTTCTGCCGTCCTCGAGCTGCTTTCCGGCGAAA 27250 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 || || ||||||||||| || | || ||| ||||| ||||| ||||| | Sbjct 27251 ATCAGTCGCTGCTGGTCTGGTGGGATGCCCTCTTTGTCCTGGATCTTCGCCTTTACGTTC 27310 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | |||| || | | || || || | ||||||||||| || ||||| ||||| || Sbjct 27311 TCGATCGTGTCAGAGGCCTCAACCTCAAGGGTGATGGTTTTACCCGTGAGGGTTTTGACG 27370 Query 34379 AAGATCTGCAT 34389 || |||||||| Sbjct 27371 AAAATCTGCAT 27381 Score = 89.7 bits (98), Expect = 3e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | || |||| ||| | || ||| ||||| || ||||| || ||| Sbjct 26927 CCTCCTCGCAGACGGAGGACCAAGTGGAGGGTGGATTCCTTCTGGATATTGTAATCAGAC 26986 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 | | || |||| || | ||| || || ||||| ||||| ||||||||||| || Sbjct 26987 AACGTGCGACCGTCCTCGAGCTGTTTACCAGCGAAGATGAGTCGCTGCTGGTCTGGTGGG 27046 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||| ||||| ||||| ||| | | | |||| || | | ||||| Sbjct 27047 ATGCCCTCTTTGTCCTGGATCTTCGCCTTCACGTTCTCGATCGTGTCAGAGGCCTCGACC 27106 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | ||||||||||| || ||||| ||||| || ||||| ||||| Sbjct 27107 TCAAGGGTGATGGTTTTACCCGTGAGGGTTTTGACGAAGATTTGCAT 27153 Score = 89.7 bits (98), Expect = 3e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | || || || || | ||| || ||||| |||||||||||||| Sbjct 27383 CCTCCACGCAGACGGAGAACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAG 27442 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || || | || || | ||| || || |||||||| || ||||| || || || Sbjct 27443 AGAGTGCGACCATCCTCGAGCTGTTTACCAGCGAAAATTAGTCGCTGTTGATCCGGTGGG 27502 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||| ||||| || || ||| | || | |||| ||| | | ||||| Sbjct 27503 ATGCCCTCTTTGTCTTGAATTTTGGCCTTGACATTTTCGATCGTATCCGAGGCCTCGACC 27562 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | ||||||||||| || ||||| ||||| |||||||| ||||| Sbjct 27563 TCGAGGGTGATGGTTTTACCCGTGAGGGTTTTTACAAAGATTTGCAT 27609 >seq2569 Length=108685 Score = 91.5 bits (100), Expect = 1e-13 Identities = 134/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 34200 CTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAA 34259 ||||||| |||||||||||||||| || | || |||| ||| || || ||||||| Sbjct 43074 CTTTCTGGATGTTGTAGTCGGACAATGTGCGTCCATCCTCCAGCTGTTTTCCAGCGAAAA 43133 Query 34260 TGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGG 34319 | | |||||||| || ||| | | ||| ||||| ||||| ||| | || Sbjct 43134 TCAATCGCTGCTGATCTGGGGGAATTCCCTCTTTGTCCTGGATCTTGGCCTTGACATTTT 43193 Query 34320 CTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAA 34379 | || | || | | ||||| || | |||||||| || || || ||||||||||||| Sbjct 43194 CGATGGTGTCTGAAGCCTCGACCTCGAGGGTGATGGTCTTACCCGTTAGAGTTTTCACAA 43253 Query 34380 AGATCTGCAT 34389 |||| ||||| Sbjct 43254 AGATTTGCAT 43263 >seq1005 Length=228466 Score = 86.0 bits (94), Expect = 4e-12 Identities = 136/193 (70%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| ||||||||||| ||||| ||| | || |||| ||| || || || || Sbjct 171703 TCCTTCTGAATGTTGTAGTCAGACAGGGTGCGGCCATCCTCCAGCTGTTTACCCGCAAAG 171644 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTG--CTTTAGAT 34316 || | ||||||||||| || | | ||||||||| || ||||| ||| | | Sbjct 171643 ATCAATCGCTGCTGGTCTGGAGGAATTCCCTCCTTGTC--CTGGATTTTGGCCTTGACGT 171586 Query 34317 CGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCA 34376 | || | |||| | ||||| || | ||||| ||||| || || |||||||| | Sbjct 171585 TTTCAATAGTGTCGGAGGCCTCGACCTCGAGAGTGATTGTTTTACCAGTCAGAGTTTTGA 171526 Query 34377 CAAAGATCTGCAT 34389 ||||||||||||| Sbjct 171525 CAAAGATCTGCAT 171513 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323024530223360