Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocentrus_20cingulum_20[genbank_20GCA_5F002156465.1_202017-05-22] 12,056 sequences; 127,916,415 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq1005 132 4e-26 seq2569 116 3e-21 seq11508 111 1e-19 >seq1005 Length=228466 Score = 132 bits (146), Expect = 4e-26 Identities = 147/196 (75%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 ||||||||| |||||||||||| ||| || | || || || || ||||||||||| Sbjct 171476 CTCCTTCTGGATGTTGTAGTCGGACAGGGTACGCCCATCCTCGAGCTGCTTTCCGGCGAA 171417 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264 ||||| ||||| ||||| || || | |||||||||||| |||||| ||| || Sbjct 171416 AATCAATCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGAATTTTAGCCTTGACGTT 171357 Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324 | | | |||||| | |||| || |||| |||||| ||||| || || || || || || Sbjct 171356 CTCAATGCTGTCGGAAGCCTCAACTTCCAAGGTAATGGTCTTACCAGTTAGTGTTTTAAC 171297 Query 45325 AAAGATTTGCATGTTG 45340 |||||| ||||||||| Sbjct 171296 AAAGATCTGCATGTTG 171281 Score = 125 bits (138), Expect = 6e-24 Identities = 150/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 45134 TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGT 45193 || ||||| ||||||||| |||||||||||| ||| ||| |||| || || || Sbjct 171943 TGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCGTCCTCGAGCTGC 171884 Query 45194 TTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTT 45253 ||||| ||||| ||||| ||||||||||| || || | |||||||||||| |||||| Sbjct 171883 TTTCCAGCGAAAATCAATCGCTGTTGGTCTGGGGGAATTCCCTCCTTGTCCTGAATTTTA 171824 Query 45254 TGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTC 45313 ||| || | | | |||||| | |||| || |||| || || || || || || Sbjct 171823 GCCTTGACGTTCTCAATGCTGTCGGAAGCCTCAACTTCCAACGTGATGGTTTTTCCAGTG 171764 Query 45314 AGAGTCTTCACAAAGATTTGCATG 45337 || ||||| || || ||||||||| Sbjct 171763 AGGGTCTTGACGAAAATTTGCATG 171740 Score = 120 bits (132), Expect = 2e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||| || || || ||||||||||||||||||||| ||| ||| | || || Sbjct 172405 ACCAAATGAAGGGTCGACTCCTTCTGAATGTTGTAGTCAGACAGAGTGCGGCCATCTTCG 172346 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 |||||||| || || || ||||| ||||| ||||| || || | |||||||||||| Sbjct 172345 AGTTGTTTACCCGCAAAGATCAATCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGG 172286 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | |||||| |||| || |||| |||||| |||||| Sbjct 172285 ATCTTAGCCTTGACGTTCTCGATGCTGTCAGAGGCCTCAACTTCCAAGGTAATGGTCTTG 172226 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || |||| || || ||||| |||||||| Sbjct 172225 CCAGTCAATGTTTTAACAAAAATTTGCAT 172197 Score = 114 bits (126), Expect = 1e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184 || ||||| ||||| || ||||||||||||||||||||| ||| ||| | || Sbjct 172180 AAGACCAAATGCAGGGTCGACTCCTTCTGAATGTTGTAGTCAGACAGGGTGCGGCCATCT 172121 Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 || |||||||| || || || ||||| ||||| ||||| || || | |||||||||||| Sbjct 172120 TCGAGTTGTTTACCCGCAAAGATCAATCGCTGCTGGTCTGGTGGGATTCCCTCCTTGTCC 172061 Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304 ||||| ||| || | | |||| |||| ||||| | ||||| || Sbjct 172060 TGGATTTTGGCCTTGACGTTTTCAATAGTGTCGGAGGCCTCGACCTCGAGAGTAATTGTT 172001 Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 || || |||||||| || |||||||| |||||| Sbjct 172000 TTACCAGTCAGAGTTTTGACAAAGATCTGCATG 171968 Score = 109 bits (120), Expect = 4e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184 || || || ||||| || ||||||||||||||||||||| ||| ||| | || Sbjct 171724 AAGACTAAATGCAGGGTCGACTCCTTCTGAATGTTGTAGTCAGACAGGGTGCGGCCATCC 171665 Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 ||||| ||||| || || || ||||| ||||| ||||| ||||| | |||||||||||| Sbjct 171664 TCCAGCTGTTTACCCGCAAAGATCAATCGCTGCTGGTCTGGAGGAATTCCCTCCTTGTCC 171605 Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304 ||||| ||| || | | |||| |||| ||||| | || || || Sbjct 171604 TGGATTTTGGCCTTGACGTTTTCAATAGTGTCGGAGGCCTCGACCTCGAGAGTGATTGTT 171545 Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 || || |||||||| || |||||||| |||||| Sbjct 171544 TTACCAGTCAGAGTTTTGACAAAGATCTGCATG 171512 >seq2569 Length=108685 Score = 116 bits (128), Expect = 3e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 45149 TTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATC 45208 ||||| |||||||||||| || | ||| | || ||||| |||||||| ||||| ||| Sbjct 43076 TTCTGGATGTTGTAGTCGGACAATGTGCGTCCATCCTCCAGCTGTTTTCCAGCGAAAATC 43135 Query 45209 AACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCC 45268 || ||||| || || || || | ||||| |||||| || || ||| || | Sbjct 43136 AATCGCTGCTGATCTGGGGGAATTCCCTCTTTGTCCTGGATCTTGGCCTTGACATTTTCG 43195 Query 45269 ACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAG 45328 | | |||| | |||| ||||| | ||| || ||||| ||||| ||||| ||||||||| Sbjct 43196 ATGGTGTCTGAAGCCTCGACCTCGAGGGTGATGGTCTTACCCGTTAGAGTTTTCACAAAG 43255 Query 45329 ATTTGCATGTTGCCTCA 45345 |||||||| || |||| Sbjct 43256 ATTTGCATTGTGGCTCA 43272 >seq11508 Length=54009 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||| || || ||| |||||||||||||||||||||| || ||| |||| || Sbjct 27857 ACCAAATGAAGGGTGGACTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGGCCGTCCTCG 27916 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || |||||||| || |||| |||||||| || || || | || ||||||||| Sbjct 27917 AGCTGCTTTCCGGCAAAGATCAGTCGCTGTTGATCCGGTGGGATGCCTTCCTTGTCCTGG 27976 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || ||| ||| || | | | ||||| |||| ||||| | ||| || ||||| Sbjct 27977 ATCTTTGCCTTGACGTTCTCAATCGTGTCCGACGCCTCGACCTCAAGGGTGATGGTCTTC 28036 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || ||||| ||||| || || ||||| Sbjct 28037 CCGGTGAGAGTTTTCACGAAAATCTGCAT 28065 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 45134 TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGT 45193 || || ||| ||||||||| |||||||||||| || |||| | || || || ||| Sbjct 27407 TGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCATCCTCGAGCTGT 27466 Query 45194 TTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTT 45253 || || ||||| || | |||||||| || || || | ||||| ||||| |||||| Sbjct 27467 TTACCAGCGAAAATTAGTCGCTGTTGATCCGGTGGGATGCCCTCTTTGTCTTGAATTTTG 27526 Query 45254 TGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTC 45313 ||| || | | | ||| |||| ||||| | ||| || || || ||||| Sbjct 27527 GCCTTGACATTTTCGATCGTATCCGAGGCCTCGACCTCGAGGGTGATGGTTTTACCCGTG 27586 Query 45314 AGAGTCTTCACAAAGATTTGCAT 45336 || || || |||||||||||||| Sbjct 27587 AGGGTTTTTACAAAGATTTGCAT 27609 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 ||||||| ||| | | |||| || || || ||| || || ||||||||||| | Sbjct 27611 CCACCTCGCAAACGGAGGACCAGATGGAGGGTCGACTCTTTTTGGATGTTGTAGTCCGAC 27670 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 || | |||| || || || ||||||||||| |||| ||||| ||||| || || Sbjct 27671 AGGGTTCTGCCGTCCTCGAGCTGCTTTCCGGCGAAAATCAGTCGCTGCTGGTCTGGTGGG 27730 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | || ||||||||| || || || || | | | |||| | |||| || Sbjct 27731 ATGCCTTCCTTGTCCTGGATCTTAGCTTTGACATTCTCGATTGTGTCGGAAGCCTCAACT 27790 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 |||| || || ||||||||||| || || || |||||||| ||||| Sbjct 27791 TCCAGAGTGATGGTCTTGCCCGTGAGGGTTTTGACAAAGATCTGCAT 27837 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || ||| |||||||| || ||||| || || |||| |||| || Sbjct 26945 ACCAAGTGGAGGGTGGATTCCTTCTGGATATTGTAATCAGACAACGTGCGACCGTCCTCG 27004 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || ||||| || ||||| || | ||||| ||||| || || | ||||| |||||| Sbjct 27005 AGCTGTTTACCAGCGAAGATGAGTCGCTGCTGGTCTGGTGGGATGCCCTCTTTGTCCTGG 27064 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | |||| |||| ||||| | ||| || || || Sbjct 27065 ATCTTCGCCTTCACGTTCTCGATCGTGTCAGAGGCCTCGACCTCAAGGGTGATGGTTTTA 27124 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 ||||| || || || || ||||||||||| Sbjct 27125 CCCGTGAGGGTTTTGACGAAGATTTGCAT 27153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395017150613176