Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocentrus_20cingulum_20[genbank_20GCA_5F002156465.1_202017-05-22] 12,056 sequences; 127,916,415 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq1005 105 5e-18 seq11508 84.2 2e-11 >seq1005 Length=228466 Score = 105 bits (116), Expect = 5e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 || || || |||| ||| |||| ||||| || || || || |||||||||||||| | | Sbjct 172423 CCGCCACGAAGTCGAAGGACCAAATGAAGGGTCGACTCCTTCTGAATGTTGTAGTCAGAC 172364 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || | |||||| | |||||| |||||| |||| | || || || || ||| Sbjct 172363 AGAGTGCGGCCATCTTCGAGTTGTTTACCCGCAAAGATCAATCGCTGCTGGTCTGGGGGA 172304 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | ||| ||||| || || | |||||| | | | ||||| || ||| | Sbjct 172303 ATGCCCTCCTTGTCCTGGATCTTAGCCTTGACGTTCTCGATGCTGTCAGAGGCCTCAACT 172244 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326 || | ||| ||| | ||||| ||||||||||| ||||||||||||||| Sbjct 172243 TCCAAGGTAATGGTCTTGCCAGTCAATGTTTTAACAAAAATTTGCATT 172196 >seq11508 Length=54009 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157 ||| || || || | || |||| ||||| || || || || |||||||||||||||| Sbjct 27838 TCCACCTCGGAGACGCAGAACCAAATGAAGGGTGGACTCCTTCTGAATGTTGTAGTCGGA 27897 Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217 | || | || || | || || || ||| |||| |||| ||||||||| || Sbjct 27898 GAGAGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAAGATCAGTCGCTGTTGATCCGGTGG 27957 Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277 | ||||||||| || || | | |||||| | ||| ||||| | |||| Sbjct 27958 GATGCCTTCCTTGTCCTGGATCTTTGCCTTGACGTTCTCAATCGTGTCCGACGCCTCGAC 28017 Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326 |||| ||||||| | || ||||| | ||||| || ||||| |||||| Sbjct 28018 CTCAAGGGTGATGGTCTTCCCGGTGAGAGTTTTCACGAAAATCTGCATT 28066 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379288262037720