Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocentrus_20cingulum_20[genbank_20GCA_5F002156465.1_202017-05-22] 12,056 sequences; 127,916,415 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq1257 100 3e-16 >seq1257 Length=117934 Score = 100 bits (110), Expect = 3e-16 Identities = 256/385 (66%), Gaps = 6/385 (2%) Strand=Plus/Minus Query 13923 AATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCG 13982 || || || || ||||| | ||| |||||||| | ||| || || || || || || Sbjct 89567 AAGGTCAAACCGGGCATGAGTCCACGTTTTTTCAGCCAGAAAATGGCGGCGAAGCTGCCA 89508 Query 13983 GAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTT 14042 |||||| ||||| || || |||||||| || | | ||| || |||| | ||| Sbjct 89507 CTAAAGAAAATTCCTTCGACCGCAGCAAAGGCCACAACTCGCTCGGCAAAACTCGATTTC 89448 Query 14043 TTGTTCGAT-ATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTC 14101 | || || | ||||| || |||||| | | || || || | || |||| Sbjct 89447 TCGT-CGTTGATCCAGTTCAAAGCCCAATTGGCCTTCTTGGCAACGCACGGCAGGTTTTC 89389 Query 14102 AATAGCATTAAATAAATATTCCTTCTCTTTAGTA--CTTGAAATGTATGTATCAATAAGT 14159 || |||||||| | | | || |||| || | ||||| ||||||| ||||| | Sbjct 89388 GATGGCATTAAACAGAAAATCTCGCTCTGAAGGATCCTTGA--TGTATGTGTCAATTAAG 89331 Query 14160 AAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTA 14219 | | |||||||| ||||||| || || || || | ||||| || || || | | | Sbjct 89330 AGGGAGTACATTTCCGAGTGTACATTCTCAATTGCAACTTGAAATCCGTAGAAAAAGCGA 89271 Query 14220 GCTTCCGACCATTGTACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCA 14279 ||||| | | || || || | |||| |||| | | |||||| || ||||||||| Sbjct 89270 GCTTCGGTCACCTGCACCTCTTGGCTGAATCGTTCGACGAGATTTTCGTTGACTATACCA 89211 Query 14280 TCACTAGCTGCAAAAAATGCCAATA 14304 ||| || ||||||||||||| || Sbjct 89210 TCAGAGGCGGCAAAAAATGCCAGTA 89186 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479655704990400