Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocentrus_20cingulum_20[genbank_20GCA_5F002156465.1_202017-05-22] 12,056 sequences; 127,916,415 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq1257 145 1e-29 seq2109 129 9e-25 >seq1257 Length=117934 Score = 145 bits (160), Expect = 1e-29 Identities = 299/436 (69%), Gaps = 8/436 (2%) Strand=Plus/Plus Query 125120 TGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAA 125179 ||| ||| | ||||| || || | |||| || ||||||| ||| ||||| || ||||| Sbjct 89163 TGAACGACACTTTATCTCACATGTACTGGCATTTTTTGCCGCCTCTGATGGTATAGTCAA 89222 Query 125180 CGACAATCT-GTTGACACGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTT- 125237 ||| ||||| || || ||||||| |||||| || | | || | ||| ||| Sbjct 89223 CGAAAATCTCGTCGA-ACGATTCAGCCAAGAGGTGCAGGTGACCGAAGC-TCGCTTTTTC 89280 Query 125238 TACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGAC 125297 |||||||| ||| | |||||||| || ||||||||||||||||| | |||||| Sbjct 89281 TACGGATTTCAAGTTGCAATTGAGAATGTACACTCGGAAATGTACTCCCTCTTAATTGAC 89340 Query 125298 ATGTACATTCGCGATCCGCAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCG 125357 | ||||| ||||| | | | | || ||||| || ||||| | ||||| Sbjct 89341 ACATACATCAAGGATCCTTCAGAGCGAGATTTTCTGTTTAATGCCATCGAAAACCTGCCG 89400 Query 125358 TCTATACGTAAAAAGGCTCAATGGGTGATTCGG--TGGATCGATGACGACAAGTCTTCGT 125415 | | || ||||| |||| || | || | |||||| | ||||| || || | Sbjct 89401 TGCGTTGCCAAGAAGGC-CAATTGG-GCTTTGAACTGGATCAACGACGAGAAATCGAGTT 89458 Query 125416 ACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTG 125475 ||||| || | ||||| || || || || || || || |||||| || || || | Sbjct 89459 TTGCCGAGCGAGTTGTGGCCTTTGCTGCGGTCGAAGGAATTTTCTTTAGTGGCAGCTTCG 89518 Query 125476 CGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGT 125535 | ||||| || ||||| || || || |||||||||||||| |||| ||| |||||| Sbjct 89519 CCGCCATTTTCTGGCTGAAAAAACGTGGACTCATGCCCGGTTTGACCTTCAGCAACGAGC 89578 Query 125536 TTATATCTCGAGACGA 125551 | ||||| ||||||| Sbjct 89579 TCATATCCAGAGACGA 89594 >seq2109 Length=239337 Score = 129 bits (142), Expect = 9e-25 Identities = 335/506 (66%), Gaps = 6/506 (1%) Strand=Plus/Plus Query 96807 ACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATGCAATGTCACGA 96866 |||||||| ||| || || ||||| ||||| | |||| || | | | || Sbjct 129753 ACAAACGGAGTATCCAACGGTCTGGTGCCCATGCTTCGCGTGTATAACCACACGGCGCGT 129812 Query 96867 TACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGG 96926 ||||| ||||||||||| || | || || || | || || || | || || ||| Sbjct 129813 TACGTGGATCAGGGCGGCAACAAGAGACCCGGAGCGTTTGCAGTTTATCTCGAGCCATGG 129872 Query 96927 CACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGA 96986 |||||||| || |||||||| | || || |||||| ||||| || ||| || Sbjct 129873 CACGCGGATGTATTTGACTTCTTGGATTTGAAGAAAAACACTGGCAAGGAGGAGTACCGT 129932 Query 96987 GCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGAC 97046 ||| | || || ||||| || || ||| | || ||| | || ||||| ||||| || || Sbjct 129933 GCCCGTGATTTATTTTACGCCCTGTGGATTCCGGATCTTTTTATGAATCGCGTAAAAAAC 129992 Query 97047 GGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGC 97106 | || ||||| || | || || || || || ||||||| ||| ||||| Sbjct 129993 GATGAGATGTGGAGTCTCTTTTGTCCTCACAAATCTCCGGGTCTGTACGAGACTTGGGGT 130052 Query 97107 GAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATACGTGAGACGAGTC 97166 || | ||||| | | || || || ||| || | | ||||| | | ||| Sbjct 130053 AAAAAATTTGAAGATATCTATGTCGCATATGAGGAAAAAAAACAGTACGTTCGCCAAGTA 130112 Query 97167 GATGCACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTAC 97226 | || || || || |||| || ||| | | | ||||||| || |||||||| || ||| Sbjct 130113 AAGGCTCGTGATCTCTGGACAGCTATCCTCAAGTCTCAGGTCGAAACTGGAACGCCATAC 130172 Query 97227 ATTCTCTACAAGGA-TACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCA--TC 97283 || ||||||||||| | || ||||| || |||||| | ||||||| || | || Sbjct 130173 ATGCTCTACAAGGACCATTGT-AATCGTAAATCCAACCAGCAGAACTTGGGAACGATTTC 130231 Query 97284 AAGGGCTCCAATCTGTGCACGGAAAT 97309 || || |||| ||||||| ||||| Sbjct 130232 AA--GCAGCAATTTGTGCACAGAAAT 130255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740947522378560