Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocentrus_20cingulum_20[genbank_20GCA_5F002156465.1_202017-05-22] 12,056 sequences; 127,916,415 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq11508 104 2e-17 seq1005 95.1 9e-15 >seq11508 Length=54009 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 15154 AACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTC 15213 ||| | ||| || ||||| || || || |||||||| ||| ||| | | | || || Sbjct 27400 AACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCATCCTC 27459 Query 15214 TAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACA 15273 | ||||| |||||| | || | || ||||| || ||| || || |||||||| Sbjct 27460 GAGCTGTTTACCAGCGAAAATTAGTCGCTGTTGATCCGGTGGGATGCCCTCTTTGTCTTG 27519 Query 15274 AATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333 ||||||| ||| ||| |||| || ||||| || || || | ||| |||||||| Sbjct 27520 AATTTTGGCCTTGACATTTTCGATCGTATCCGAGGCCTCGACCTCGAGGGTGATGGTTTT 27579 Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 ||| || || ||||||||||| |||||||| Sbjct 27580 ACCCGTGAGGGTTTTTACAAAGATTTGCAT 27609 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 ||||||| ||| | | || | ||| ||||| || |||||||| |||||||| || Sbjct 27155 CCACCTCGCAAACGGAGGACCAGATGGAGGGTCGACTCTTTTTGGATGTTGTAGTCCGAC 27214 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 || |||| |||| || | || || || ||| | |||| || || ||||| ||| Sbjct 27215 AGGGTTCTGCCGTCCTCGAGCTGCTTTCCGGCGAAAATCAGTCGCTGCTGGTCTGGTGGG 27274 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || || |||||||| || || |||||| | || || || || || || Sbjct 27275 ATGCCCTCTTTGTCCTGGATCTTCGCCTTTACGTTCTCGATCGTGTCAGAGGCCTCAACC 27334 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || | ||| ||||||||||| || || ||||| || ||||| ||||| Sbjct 27335 TCAAGGGTGATGGTTTTACCCGTGAGGGTTTTGACGAAAATCTGCAT 27381 >seq1005 Length=228466 Score = 95.1 bits (104), Expect = 9e-15 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 15152 AAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCT 15211 || || ||||| ||||| || || || || |||||||| || || | | | ||| Sbjct 172180 AAGACCAAATGCAGGGTCGACTCCTTCTGAATGTTGTAGTCAGACAGGGTGCGGCCATCT 172121 Query 15212 TCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCA 15271 || | |||||| || || | ||||| || || ||||| ||| ||||| || ||||| Sbjct 172120 TCGAGTTGTTTACCCGCAAAGATCAATCGCTGCTGGTCTGGTGGGATTCCCTCCTTGTCC 172061 Query 15272 CAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTT 15331 |||||| ||| || |||| || || ||| || || || | ||||| ||| Sbjct 172060 TGGATTTTGGCCTTGACGTTTTCAATAGTGTCGGAGGCCTCGACCTCGAGAGTAATTGTT 172001 Query 15332 TTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 ||||| ||||||||||| ||||| || ||||| Sbjct 172000 TTACCAGTCAGAGTTTTGACAAAGATCTGCAT 171969 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 15160 ATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTG 15219 ||| || || || || || || |||||||| ||| || | | | |||| || | || Sbjct 171944 ATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCGTCCTCGAGCTG 171885 Query 15220 TTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTT 15279 || |||||| | ||||| || |||||||| |||||||| || ||||| |||||| Sbjct 171884 CTTTCCAGCGAAAATCAATCGCTGTTGGTCTGGGGGAATTCCCTCCTTGTCCTGAATTTT 171825 Query 15280 GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGT 15339 ||| || | || ||| | ||| | || || || || || |||||||| || || Sbjct 171824 AGCCTTGACGTTCTCAATGCTGTCGGAAGCCTCAACTTCCAACGTGATGGTTTTTCCAGT 171765 Query 15340 CAGAGTTTTTACAAAAATTTGCAT 15363 || || || || ||||||||||| Sbjct 171764 GAGGGTCTTGACGAAAATTTGCAT 171741 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 15152 AAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCT 15211 || |||||||| ||||| || || || || |||||||| || || | | | || Sbjct 171724 AAGACTAAATGCAGGGTCGACTCCTTCTGAATGTTGTAGTCAGACAGGGTGCGGCCATCC 171665 Query 15212 TCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCA 15271 || | ||||| || || | ||||| || || ||||| |||||||| || ||||| Sbjct 171664 TCCAGCTGTTTACCCGCAAAGATCAATCGCTGCTGGTCTGGAGGAATTCCCTCCTTGTCC 171605 Query 15272 CAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTT 15331 |||||| ||| || |||| || || ||| || || || | || || ||| Sbjct 171604 TGGATTTTGGCCTTGACGTTTTCAATAGTGTCGGAGGCCTCGACCTCGAGAGTGATTGTT 171545 Query 15332 TTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 ||||| ||||||||||| ||||| || ||||| Sbjct 171544 TTACCAGTCAGAGTTTTGACAAAGATCTGCAT 171513 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214 || ||||||||||| || || || || |||||||| || ||| | | | ||||| Sbjct 172405 ACCAAATGAAGGGTCGACTCCTTCTGAATGTTGTAGTCAGACAGAGTGCGGCCATCTTCG 172346 Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274 | |||||| || || | ||||| || || ||||| ||||| || || ||||| Sbjct 172345 AGTTGTTTACCCGCAAAGATCAATCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGG 172286 Query 15275 ATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTA 15334 || || ||| || | || ||| | || || || || ||||||||||| || Sbjct 172285 ATCTTAGCCTTGACGTTCTCGATGCTGTCAGAGGCCTCAACTTCCAAGGTAATGGTCTTG 172226 Query 15335 CCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || |||| ||||| |||||||||||||| Sbjct 172225 CCAGTCAATGTTTTAACAAAAATTTGCAT 172197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362125984104696