Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocentrus_20cingulum_20[genbank_20GCA_5F002156465.1_202017-05-22] 12,056 sequences; 127,916,415 total letters Query= NC_005905.1 Length=86462 Score E Sequences producing significant alignments: (Bits) Value seq8158 295 4e-75 >seq8158 Length=31205 Score = 295 bits (326), Expect = 4e-75 Identities = 459/643 (71%), Gaps = 11/643 (2%) Strand=Plus/Plus Query 3503 TCCAACCCATTCGAATTAGTGGGCAAAGCtttttttATCAACAGAGGTGCTGTAAAAATG 3562 || || ||||| |||| | | ||| |||||||| |||| | | |||||||| ||| Sbjct 3780 TCAAATCCATTTGAATCAATTCGCAGTGCTTTTTTCCTCAATCGCGCAGCTGTAAAGATG 3839 Query 3563 GCAAACATTGATCATGCAACGAATTTCGTATTTACACGATTG-AATGATG--GATCA-AA 3618 || ||||| ||| | ||| |||| | || ||| ||| |||| | ||| | || Sbjct 3840 GCCAACATGGATAAAGCATGTGGTTTCATGTTCACA-GATGCTAATGCAGCAGATAATAA 3898 Query 3619 TGAATTGATATATTTTGCTGACGTATGCGCTGGTCCAGGTGGTTTCAGTGAATATATGTT 3678 |||||| | |||||||| || || || || || |||||||| |||||||| ||| | || Sbjct 3899 TGAATTACTCTATTTTGCCGATGTTTGTGCAGGCCCAGGTGGCTTCAGTGAGTATGTTTT 3958 Query 3679 ATGGAGAAAGAAATGGAATATCAAAGGTTATGGTATGACGTTACGCGaaaaaaaTGATTT 3738 |||| | || |||||| | ||| |||| |||| | || | || || |||||||| Sbjct 3959 ATGGCGGAAAAAATGGCACGCCAAGGGTTTTGGTTTTACTCTGCGAGATGCTAATGATTT 4018 Query 3739 TCAACTGAACAGATTTT-ACGATAACTTTTCGGAAACTTTACACCCGTATTATGGTCCGC 3797 ||| | | |||||| ||| | | | || || || || |||| ||| || ||| Sbjct 4019 -CAAATTAGATGATTTTTACGCTGGATCACCAGAGACATTTCATCCGTTTTACGGGCCGA 4077 Query 3798 TTAACGATGGTAATATCTACAATTCACAAAATCAGAAAGGTTTTTGTGAAATGATTATGA 3857 | ||||| ||| ||||| || || | ||||| ||| ||| || | ||||||| Sbjct 4078 AAGAGGATGGAAATGTCTACGATCCAGATAATCAAGAAGCCTTTAAAAAATTAATTATGA 4137 Query 3858 AAGATACCGAAGGA-AAAGGTGTACATTTTATGATGGCTGACGGTGGGTTCTCGGTTGAG 3916 | || | ||| ||||| ||||||||||||||||| |||||||| || || |||||| Sbjct 4138 GTCAAAC-GCGGGACAAAGGAGTACATTTTATGATGGCCGACGGTGGATTTTCTGTTGAG 4196 Query 3917 GGTCAAGAAAATATGCAAGAAATGTTATCGAAAAAGATGTATTTGTGTCAATGTTTAATT 3976 ||| |||||||||| |||||||| | || ||| || |||| | || |||||| | | Sbjct 4197 GGTAAAGAAAATATTCAAGAAATACTCTCAAAACAGCTGTACCTTTGCCAATGTCTTGTG 4256 Query 3977 GCATTGATGATCATACGAATTGGTGGTCATTGTGTTATCAAATTTTTCGATATATTTACA 4036 ||| | ||||| | || | ||| || |||| ||| | ||| |||||||| |||||||| Sbjct 4257 GCACTCATGATTGTTCGCACTGGCGGCCATTTTGTGACAAAAGTTTTCGATTTATTTACA 4316 Query 4037 CCTTTTAGTGCTGGTTTAGTGTATTTGATGTATAGATC-TTTTAATCGTATTTGTATTTT 4095 || || |||||||| || || ||||| |||||| | || || ||||| || | || || Sbjct 4317 CCCTTCAGTGCTGGATTGGTTTATTTAATGTATCGCTCGTTCAAATCG-ATATCCATCTT 4375 Query 4096 CAAACCACATTCATCGCGACCGGCCAATTCTGAAAGATATTTG 4138 |||||| | ||||| ||||||| || || || ||||| ||| Sbjct 4376 CAAACCCAACACATCGAGACCGGCTAACTCAGAGAGATACTTG 4418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 276512965288168