Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocentrus_20cingulum_20[genbank_20GCA_5F002156465.1_202017-05-22] 12,056 sequences; 127,916,415 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq1176 107 1e-18 seq7521 100 1e-16 >seq1176 Length=33214 Score = 107 bits (118), Expect = 1e-18 Identities = 76/88 (86%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 |||||| |||||||| | || |||||||||| |||||||||||||||||||||||| Sbjct 13388 AAAAAAAAAAATTGGCTCCTGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGAC 13447 Query 11504 GCTCTRACCAACTGAGCTAATGGGCCGT 11531 ||||| |||||||||||||| | ||||| Sbjct 13448 GCTCTAACCAACTGAGCTAAGGAGCCGT 13475 Score = 93.3 bits (102), Expect = 2e-14 Identities = 67/78 (86%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||| |||| | || |||||||||| ||||||||||||||||||||||||||||| || Sbjct 13245 AAAATGGCTCCTGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAAC 13304 Query 11512 CAACTGAGCTAATGGGCC 11529 |||||||||||| | ||| Sbjct 13305 CAACTGAGCTAAGGAGCC 13322 >seq7521 Length=32036 Score = 100 bits (110), Expect = 1e-16 Identities = 78/94 (83%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 || |||||| | | |||| | || |||||||||| ||||||||||||||||||||| Sbjct 14020 AAGAAAAAAAAATAATGGCTCCTGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCAC 14079 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCCGTCGA 11534 |||||||| |||||||||||||| | ||||| || Sbjct 14080 GACGCTCTAACCAACTGAGCTAAGGAGCCGTTGA 14113 Score = 100 bits (110), Expect = 1e-16 Identities = 77/92 (84%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 11439 TTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGC 11498 ||||| |||| ||| |||| | || |||||||||| ||||||||||||||||||| Sbjct 14515 TTAATTTAAAAAAAAACTGGCTCCTGGGGGGATCGAACCCACGACCTTCGCGTTATTAGC 14574 Query 11499 ACGACGCTCTRACCAACTGAGCTAATGGGCCG 11530 |||||||||| |||||||||||||| | |||| Sbjct 14575 ACGACGCTCTAACCAACTGAGCTAAGGAGCCG 14606 Lambda K H 0.639 0.410 0.920 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261452778444256