Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocentrus_20cingulum_20[genbank_20GCA_5F002156465.1_202017-05-22] 12,056 sequences; 127,916,415 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq1005 156 4e-33 seq11508 114 1e-20 seq2569 114 1e-20 >seq1005 Length=228466 Score = 156 bits (172), Expect = 4e-33 Identities = 179/241 (74%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 94769 AAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACG 94828 ||| ||| || ||||| | || ||||| || || |||| || || ||||| || | | Sbjct 171751 AAAATTTGCATGCCTCCACGCAGACGCAAGACTAAATGCAGGGTCGACTCCTTCTGAATG 171692 Query 94829 TTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGC 94888 || || || || ||| | ||||||||||||||| || ||||||| |||| ||| Sbjct 171691 TTGTAGTCAGACAGGGTGCGGCCATCCTCCAGCTGTTTACCCGCAAAGATCAATCGCTGC 171632 Query 94889 TGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCA 94948 || ||||||||||| || || ||||| | ||||| ||||||||| | | |||||| Sbjct 171631 TGGTCTGGAGGAATTCCCTCCTTGTCCTGGATTTTGGCCTTGACGTTTTCAATAGTGTCG 171572 Query 94949 GCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATG 95008 | | ||||| || | ||||| ||||| ||||| |||||||| ||||||||||||||| Sbjct 171571 GAGGCCTCGACCTCGAGAGTGATTGTTTTACCAGTCAGAGTTTTGACAAAGATCTGCATG 171512 Query 95009 C 95009 | Sbjct 171511 C 171511 Score = 140 bits (154), Expect = 3e-28 Identities = 176/242 (73%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| ||| || |||||| | || ||||| ||||| |||| || || ||||| || | Sbjct 172208 AAAAATTTGCATTCCTCCACGCAGACGCAAGACCAAATGCAGGGTCGACTCCTTCTGAAT 172149 Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887 ||| || || || ||| | ||| || || ||||| || ||||||| |||| || Sbjct 172148 GTTGTAGTCAGACAGGGTGCGGCCATCTTCGAGTTGTTTACCCGCAAAGATCAATCGCTG 172089 Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947 ||| ||||| || || || || ||||| | ||||| ||||||||| | | |||||| Sbjct 172088 CTGGTCTGGTGGGATTCCCTCCTTGTCCTGGATTTTGGCCTTGACGTTTTCAATAGTGTC 172029 Query 94948 AGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | | ||||| || | || || ||||| ||||| |||||||| |||||||||||||| Sbjct 172028 GGAGGCCTCGACCTCGAGAGTAATTGTTTTACCAGTCAGAGTTTTGACAAAGATCTGCAT 171969 Query 95008 GC 95009 || Sbjct 171968 GC 171967 Score = 98.7 bits (108), Expect = 9e-16 Identities = 116/157 (74%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 |||||| ||||| |||||| | || || |||| ||||| ||||| ||||| || || || Sbjct 171440 ATCCTCGAGCTGCTTTCCGGCGAAAATCAATCGCTGCTGGTCTGGGGGAATGCCCTCCTT 171381 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 ||| | |||||| ||||||||| | | |||| | || || || | || || Sbjct 171380 GTCCTGAATTTTAGCCTTGACGTTCTCAATGCTGTCGGAAGCCTCAACTTCCAAGGTAAT 171321 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATG 95008 ||| || ||||| || ||||| ||||||||||||||| Sbjct 171320 GGTCTTACCAGTTAGTGTTTTAACAAAGATCTGCATG 171284 Score = 89.7 bits (98), Expect = 5e-13 Identities = 114/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||| ||||| ||||| | || || |||| || || ||||| ||||| || || ||| Sbjct 171895 TCCTCGAGCTGCTTTCCAGCGAAAATCAATCGCTGTTGGTCTGGGGGAATTCCCTCCTTG 171836 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | |||||| ||||||||| | | |||| | || || || | ||||||| Sbjct 171835 TCCTGAATTTTAGCCTTGACGTTCTCAATGCTGTCGGAAGCCTCAACTTCCAACGTGATG 171776 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 ||||||||||| || || || || || || ||||||| Sbjct 171775 GTTTTTCCAGTGAGGGTCTTGACGAAAATTTGCATGC 171739 >seq11508 Length=54009 Score = 114 bits (126), Expect = 1e-20 Identities = 167/236 (71%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 94772 TTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTA 94831 ||||| | ||||||| || || | |||||||| | || |||||||| || | || Sbjct 26918 TTTTAAGCACCTCCTCGCAGACGGAGGACCAAGTGGAGGGTGGATTCCTTCTGGATATTG 26977 Query 94832 TAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGA 94891 ||||| || ||| ||||| |||||||| || | ||||| | || ||||| Sbjct 26978 TAATCAGACAACGTGCGACCGTCCTCGAGCTGTTTACCAGCGAAGATGAGTCGCTGCTGG 27037 Query 94892 TCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCG 94951 ||||| || || || |||||||| | || || ||||| ||| ||| ||||||| | Sbjct 27038 TCTGGTGGGATGCCCTCTTTGTCCTGGATCTTCGCCTTCACGTTCTCGATCGTGTCAGAG 27097 Query 94952 TGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| |||| ||||||||||| || || || ||||| || ||||| ||||| Sbjct 27098 GCCTCGACCTCAAGGGTGATGGTTTTACCCGTGAGGGTTTTGACGAAGATTTGCAT 27153 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 94777 CACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATC 94836 || ||| |||| | |||| ||||| || | || || ||||| || | ||| || || Sbjct 27835 CATTCCACCTCGGAGACGCAGAACCAAATGAAGGGTGGACTCCTTCTGAATGTTGTAGTC 27894 Query 94837 GCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGG 94896 | | |||| | ||||| ||||| |||||| ||||||| | || || ||||| || Sbjct 27895 GGAGAGAGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAAGATCAGTCGCTGTTGATCCGG 27954 Query 94897 AGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTC 94956 || || ||||| ||||| | || |||||||||||| | | ||||| | || Sbjct 27955 TGGGATGCCTTCCTTGTCCTGGATCTTTGCCTTGACGTTCTCAATCGTGTCCGACGCCTC 28014 Query 94957 GACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||| |||| |||||||| || || || ||||||||||| || |||||||| Sbjct 28015 GACCTCAAGGGTGATGGTCTTCCCGGTGAGAGTTTTCACGAAAATCTGCAT 28065 Score = 107 bits (118), Expect = 2e-18 Identities = 166/237 (70%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 94773 TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTAT 94832 ||| || ||| |||| ||| || | |||| || | || || || ||||| | ||| | Sbjct 27147 TTTGCATTCCACCTCGCAAACGGAGGACCAGATGGAGGGTCGACTCTTTTTGGATGTTGT 27206 Query 94833 AATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGAT 94892 | || || || || ||||| ||||| |||||| | || || | || ||||| | Sbjct 27207 AGTCCGACAGGGTTCTGCCGTCCTCGAGCTGCTTTCCGGCGAAAATCAGTCGCTGCTGGT 27266 Query 94893 CTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGT 94952 |||| || || || |||||||| | || || ||||| ||| ||| ||||||| | Sbjct 27267 CTGGTGGGATGCCCTCTTTGTCCTGGATCTTCGCCTTTACGTTCTCGATCGTGTCAGAGG 27326 Query 94953 GGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || || |||| ||||||||||| || || || ||||| || || |||||||||| Sbjct 27327 CCTCAACCTCAAGGGTGATGGTTTTACCCGTGAGGGTTTTGACGAAAATCTGCATGC 27383 Score = 100 bits (110), Expect = 3e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 94810 AGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCC 94869 ||| || ||||| || | ||| || ||| | |||| |||||| |||||||| || Sbjct 27412 AGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCATCCTCGAGCTGTTTACC 27471 Query 94870 GCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTT 94929 | || |||| || || ||||| || || || || |||||||| | |||||| ||||| Sbjct 27472 AGCGAAAATTAGTCGCTGTTGATCCGGTGGGATGCCCTCTTTGTCTTGAATTTTGGCCTT 27531 Query 94930 GACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGT 94989 ||| ||| || || | | ||||| || | ||||||||||| || || || || Sbjct 27532 GACATTTTCGATCGTATCCGAGGCCTCGACCTCGAGGGTGATGGTTTTACCCGTGAGGGT 27591 Query 94990 TTTCACAAAGATCTGCAT 95007 ||| |||||||| ||||| Sbjct 27592 TTTTACAAAGATTTGCAT 27609 Score = 95.1 bits (104), Expect = 1e-14 Identities = 171/249 (69%), Gaps = 1/249 (0%) Strand=Plus/Plus Query 94760 GGTTTTTTAAAAT-TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTC 94818 ||||||| ||| ||| || ||| |||| ||| || | |||| || | || || || Sbjct 27589 GGTTTTTACAAAGATTTGCATTCCACCTCGCAAACGGAGGACCAGATGGAGGGTCGACTC 27648 Query 94819 CTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGAT 94878 ||||| | ||| || || || || || ||||| ||||| |||||| | || || Sbjct 27649 TTTTTGGATGTTGTAGTCCGACAGGGTTCTGCCGTCCTCGAGCTGCTTTCCGGCGAAAAT 27708 Query 94879 TAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCC 94938 | || ||||| ||||| || || ||||| ||||| | || || || ||||| | Sbjct 27709 CAGTCGCTGCTGGTCTGGTGGGATGCCTTCCTTGTCCTGGATCTTAGCTTTGACATTCTC 27768 Query 94939 GACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAA 94998 || ||||| | || || || | |||||||| || || || || ||||| ||||| Sbjct 27769 GATTGTGTCGGAAGCCTCAACTTCCAGAGTGATGGTCTTGCCCGTGAGGGTTTTGACAAA 27828 Query 94999 GATCTGCAT 95007 ||||||||| Sbjct 27829 GATCTGCAT 27837 >seq2569 Length=108685 Score = 114 bits (126), Expect = 1e-20 Identities = 119/156 (76%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 |||||||||||||||||| | || || |||| ||||||||||| ||||| || ||||| Sbjct 43108 ATCCTCCAGCTGTTTTCCAGCGAAAATCAATCGCTGCTGATCTGGGGGAATTCCCTCTTT 43167 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 ||| | || || |||||||| ||| ||||| | ||||| || | ||||| Sbjct 43168 GTCCTGGATCTTGGCCTTGACATTTTCGATGGTGTCTGAAGCCTCGACCTCGAGGGTGAT 43227 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||| || || || ||||||||||||||||| ||||| Sbjct 43228 GGTCTTACCCGTTAGAGTTTTCACAAAGATTTGCAT 43263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448223642516160