Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocentrus_20cingulum_20[genbank_20GCA_5F002156465.1_202017-05-22] 12,056 sequences; 127,916,415 total letters Query= NC_006565.1 Length=131522 Score E Sequences producing significant alignments: (Bits) Value seq7040 138 1e-27 seq10999 114 1e-20 >seq7040 Length=4944 Score = 138 bits (152), Expect = 1e-27 Identities = 113/136 (83%), Gaps = 1/136 (1%) Strand=Plus/Plus Query 56236 TAGGGTGTTATT-AATATACTTGACGTCCCGTCGACAACAAGATGTTAAGAACTAAATAC 56294 || ||||||||| |||||||| | ||| ||| ||| |||||| |||||||||||| ||| Sbjct 1595 TAAGGTGTTATTTAATATACTAGTAGTCACGTAGACCACAAGACGTTAAGAACTAACTAC 1654 Query 56295 TAACGACAGACACACTATTAATATTATATAGCCTAAGCCTAGGCGAACCATAAGCCGAGA 56354 |||||| |||||||||||||||||||||||| || |||||||||| |||||||| | Sbjct 1655 TAACGATAGACACACTATTAATATTATATAGTCTCAGCCTAGGCGGGTTCTAAGCCGACA 1714 Query 56355 CCATTCGCACAATTAT 56370 |||| |||||||| Sbjct 1715 TGTTTCGGACAATTAT 1730 >seq10999 Length=1466 Score = 114 bits (126), Expect = 1e-20 Identities = 63/63 (100%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 49197 AAAACCAGCTCTCCAAACTGACCAAGGTTTAGATGAGAGCTGGTTAATAGTTAATCAGTT 49256 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 697 AAAACCAGCTCTCCAAACTGACCAAGGTTTAGATGAGAGCTGGTTAATAGTTAATCAGTT 756 Query 49257 GTT 49259 ||| Sbjct 757 GTT 759 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420683778797128