Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocentrus_20cingulum_20[genbank_20GCA_5F002156465.1_202017-05-22] 12,056 sequences; 127,916,415 total letters Query= NC_006633.1 Length=27346 Score E Sequences producing significant alignments: (Bits) Value seq1468 187 4e-43 seq8017 178 2e-40 seq2384 167 4e-37 seq4989 134 2e-27 seq4395 134 2e-27 >seq1468 Length=26024 Score = 187 bits (206), Expect = 4e-43 Identities = 175/220 (80%), Gaps = 7/220 (3%) Strand=Plus/Plus Query 22971 ATCTTAATGTGAGTTTATAGAATATGCGAGAAAAAATTATTAGAGACAGCTCGGACTGGG 23030 |||| |||| |||| ||||||||||| ||||||| ||| | |||||||| ||||| Sbjct 9998 ATCTCAATGGGAGTGTATAGAATATGTGAGAAAACATTCGGA---ACAGCTCGAGCTGGG 10054 Query 23031 ATACGAACCCAGAACCTTCCGAAGACATGTCGGCTACTCTATCATTTGAGCTATCCGGTC 23090 || |||||||||||||| ||| ||||||| || ||||| |||||||||| ||||| Sbjct 10055 ATTCGAACCCAGAACCTGTCGATTACATGTCATCTGCTCTACGATTTGAGCTACACGGTC 10114 Query 23091 TATACTAAATTTTCTTTCACTTATTCTATATACATTAAGCCACACCGTCCATCTTACGGT 23150 || | || || | |||||||||||||||| ||| ||||||||||||||||||||||| Sbjct 10115 TA---TGAAGTTCCCTTCACTTATTCTATATCTATTGAGCCACACCGTCCATCTTACGGT 10171 Query 23151 TAGCATTTTTAACAAATATAAATAATGCTGTGAAGCGGGA 23190 || ||| || |||| || ||||||||| |||||||| Sbjct 10172 AAGTATTATT-TTAAATGCAAGTAATGCTGTAAAGCGGGA 10210 >seq8017 Length=23477 Score = 178 bits (196), Expect = 2e-40 Identities = 212/288 (74%), Gaps = 15/288 (5%) Strand=Plus/Minus Query 2613 AAAAAGAAATTATTCCGGTACGATTATTTTTTCGACCAATTTCCCTGCCACATACACTCA 2672 ||||| | ||| |||||||| | | | |||||||||||||||| |||||||||||| | Sbjct 17437 AAAAAAACATTCTTCCGGTAAGCTAAATTTTTCGACCAATTTCTCTGCCACATACATGGA 17378 Query 2673 TTCATA----------CACGGACGTCCaaaaaaaattatgtttaatgttattatttatta 2722 | |||| |||||| ||||| || ||| ||||||||||||||||| || Sbjct 17377 TCCATAACCACAGACTAACGGACCTCCAAGAATGATTGATTTTAATGTTATTATTTACTA 17318 Query 2723 tgttaatcaaaaaaattgttattaaaatatatattatgtGCCTGAAAAATTATTTGACTT 2782 | |||| |||| ||||||| ||||| ||| ||||||| | | | ||||||| |||| Sbjct 17317 TATTAAACAAAGTAATTGTTCATAAAAAATACCATATGTGCTTAATAGATTATTTAACTT 17258 Query 2783 GACATAAGTGTACTCATTTTAACCTGTAAGTGCAAT----ATAAATAACAAAAAATCAAT 2838 || | |||| |||||| ||| || ||||||| || |||| || |||||| || Sbjct 17257 GATTTTAGTGCACTCATATTATCCAGTAAGTGTTATGTTAGTAAAAAAAAAAAAAGTCAT 17198 Query 2839 TTCAGTTTCGACAAAACTGCTTTTTTCGAAATATCGAGAATAGAGCAC 2886 | ||||| || || |||| ||||| || || |||||| |||||||| Sbjct 17197 TCAAGTTTTGA-AAGACTGGATTTTTTGACATGTCGAGAGTAGAGCAC 17151 Score = 116 bits (128), Expect = 6e-22 Identities = 114/142 (80%), Gaps = 4/142 (3%) Strand=Plus/Minus Query 2529 TTTTTTATAAATAATAATTTAACGAGAGTAAATTGAACGCTCATATTAACTAAGAAATTC 2588 |||||||||||| |||||| ||||| |||| | ||||||| |||| ||||| ||||| Sbjct 17621 TTTTTTATAAATTATAATTAAACGAAAGTACCTAGAACGCTAATAT-AACTA-GAAATCA 17564 Query 2589 TGTC-GTGTATTACTTTAGATAATTAAAAAGAA-ATTATTCCGGTACGATTATTTTTTCG 2646 | | |||| ||| || ||||| ||||| || ||| |||||||| | | | ||||||| Sbjct 17563 GCACAGGGTATAACTGTATATAATAAAAAAAAACATTCTTCCGGTAAGCTAAATTTTTCG 17504 Query 2647 ACCAATTTCCCTGCCACATACA 2668 ||||||||| |||||||||||| Sbjct 17503 ACCAATTTCTCTGCCACATACA 17482 >seq2384 Length=3294 Score = 167 bits (184), Expect = 4e-37 Identities = 167/209 (80%), Gaps = 11/209 (5%) Strand=Plus/Minus Query 22853 TAATGTTGTGAAACGAGAAAGAGTAGGAGTTACG-GATAATTATTACGTGAAGCGTTCCA 22911 ||||| ||| || | |||||||| | ||||||| | ||||||||||||||||||||||| Sbjct 2622 TAATGCTGTAAAGCAGGAAAGAGTGGAAGTTACGAGGTAATTATTACGTGAAGCGTTCCA 2563 Query 22912 ACAT--TCACGTAACAGGATAATTGGTAGGA-AAGGATTGAGAAAGGATTGTGGAGAGGA 22968 | | |||||| ||||| || || |||| ||||||||||| || || | ||| |||| Sbjct 2562 -CTTCCTCACGTGACAGGGTAG--GGAAGGATAAGGATTGAGAGAGAAT-GAGGAAAGGA 2507 Query 22969 TCATCTTAATGTGAGTTTATAGAATATGCGAGAAAAAATTATTAGAGACAGCTCGGACTG 23028 ||||| |||| |||||||||||||||| ||||||| ||| | || | |||| ||| Sbjct 2506 CCATCTCAATGGGAGTTTATAGAATATGTGAGAAAA---GATTCGGGATAACTCGAGCTG 2450 Query 23029 GGATACGAACCCAGAACCTTCCGAAGACA 23057 |||| ||||||||||||||| ||| |||| Sbjct 2449 GGATTCGAACCCAGAACCTTTCGATGACA 2421 >seq4989 Length=1177 Score = 134 bits (148), Expect = 2e-27 Identities = 129/159 (81%), Gaps = 6/159 (4%) Strand=Plus/Plus Query 22853 TAATGTTGTGAAACGAGAAAGAGTAGGAGTTACG-GATAATTATTACGTGAAGCGTTCCA 22911 ||||| ||| || | |||||||| | ||||||| | ||||||||||||||||||||||| Sbjct 1018 TAATGCTGTAAAGCAGGAAAGAGTGGAAGTTACGAGGTAATTATTACGTGAAGCGTTCCA 1077 Query 22912 ACAT-TCACGTAACAGGATAATTGGTAGGA-AAGGATTGAGAAAGGATTGTGGAGAGGAT 22969 | |||||| ||||| || || |||| ||||||||||| || || | ||| |||| Sbjct 1078 CTTTCTCACGTGACAGGGTAG--GGAAGGATAAGGATTGAGAGAGAAT-GAGGAAAGGAC 1134 Query 22970 CATCTTAATGTGAGTTTATAGAATATGCGAGAAAAAATT 23008 ||||| |||| |||||||||||||||| ||||||| ||| Sbjct 1135 CATCTCAATGGGAGTTTATAGAATATGTGAGAAAAGATT 1173 >seq4395 Length=14685 Score = 134 bits (148), Expect = 2e-27 Identities = 130/160 (81%), Gaps = 8/160 (5%) Strand=Plus/Plus Query 22853 TAATGTTGTGAAACGAGAAAGAGTAGGAGTTACG-GATAATTATTACGTGAAGCGTTCCA 22911 ||||| ||| || | |||||||| | ||||||| | ||||||||||||||||||||||| Sbjct 3687 TAATGCTGTAAAGCAGGAAAGAGTGGAAGTTACGAGGTAATTATTACGTGAAGCGTTCCA 3746 Query 22912 ACAT--TCACGTAACAGGATAATTGGTAGGA-AAGGATTGAGAAAGGATTGTGGAGAGGA 22968 | | |||||| ||||| || || |||| ||||||||||| || || | ||| |||| Sbjct 3747 -CTTCCTCACGTGACAGGGTAG--GGAAGGATAAGGATTGAGAGAGAAT-GAGGAAAGGA 3802 Query 22969 TCATCTTAATGTGAGTTTATAGAATATGCGAGAAAAAATT 23008 ||||| |||| |||||||||||||||| ||||||| ||| Sbjct 3803 CCATCTCAATGGGAGTTTATAGAATATGTGAGAAAAGATT 3842 Score = 116 bits (128), Expect = 6e-22 Identities = 114/143 (80%), Gaps = 7/143 (5%) Strand=Plus/Plus Query 22916 TCACGTAACAGGATAATTGGTAGGA-AAGGATTGAGAAAGGATTGTGGAGAGGATCATCT 22974 |||||| ||||| || || |||| ||||||||||| || || | ||| |||| ||||| Sbjct 3852 TCACGTGACAGGGTAG--GGAAGGATAAGGATTGAGAGAGAAT-GAGGAAAGGACCATCT 3908 Query 22975 TAATGTGAGTTTATAGAATATGCGAGAAAAAATTATTAGAGACAGCTCGGACTGGGATAC 23034 |||| |||||||||||||||| ||||||| ||| | || | |||| ||||||| | Sbjct 3909 CAATGGGAGTTTATAGAATATGTGAGAAAA---GATTCGGGATAACTCGAGCTGGGATTC 3965 Query 23035 GAACCCAGAACCTTCCGAAGACA 23057 |||||||||||||| ||| |||| Sbjct 3966 GAACCCAGAACCTTTCGATGACA 3988 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 87376618219752