Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocentrus_20cingulum_20[genbank_20GCA_5F002156465.1_202017-05-22] 12,056 sequences; 127,916,415 total letters Query= NC_006634.1 Length=14975 Score E Sequences producing significant alignments: (Bits) Value seq2384 174 2e-39 seq4989 134 1e-27 seq4395 134 1e-27 seq1468 118 1e-22 seq3382 78.8 9e-11 >seq2384 Length=3294 Score = 174 bits (192), Expect = 2e-39 Identities = 168/207 (81%), Gaps = 9/207 (4%) Strand=Plus/Plus Query 948 TGTCTTCGGAAGGTTCTGGGTTCGAATCCCAGTCCGAGCTATCTAATAATTTTTTCTCGC 1007 |||| ||| ||||||||||||||||||||||| |||| |||| ||| ||||||| | Sbjct 2421 TGTCATCGAAAGGTTCTGGGTTCGAATCCCAGCTCGAGTTATC-CCGAATCTTTTCTCAC 2479 Query 1008 ATATTCTATACACTCACATTAAGAAGTTCCTCTCCATAATCCTTTCTCAATCCTT-TCCT 1066 |||||||||| |||| |||| ||| | |||| ||| | || || ||||||||||| |||| Sbjct 2480 ATATTCTATAAACTCCCATTGAGATGGTCCTTTCC-TCATTCTCTCTCAATCCTTATCCT 2538 Query 1067 ACCAATTATCCTGTTACGTGA--ATGTTGGAACGCTTCACGTAATAATTATC-CGTAACT 1123 || || ||||| |||||| | | ||||||||||||||||||||||| | ||||||| Sbjct 2539 TCC--CTACCCTGTCACGTGAGGAAG-TGGAACGCTTCACGTAATAATTACCTCGTAACT 2595 Query 1124 CCTATTCTTTCCCGCTTCACAGCATTA 1150 | | ||||||| |||| ||||||||| Sbjct 2596 TCCACTCTTTCCTGCTTTACAGCATTA 2622 Score = 132 bits (146), Expect = 5e-27 Identities = 151/201 (75%), Gaps = 7/201 (3%) Strand=Plus/Plus Query 1217 TCGGAAGGTTCTGGGTTCGAATCCCAGTCCGAGCTATCTAATAATTTTTTCTCGCATATT 1276 ||| ||||||||||||||||||||||| |||| |||| ||| ||||||| |||||| Sbjct 2426 TCGAAAGGTTCTGGGTTCGAATCCCAGCTCGAGTTATCCCG-AATCTTTTCTCACATATT 2484 Query 1277 CTATACACTCACATTAAGATGATCCTCTTCACAATCCTTNNNNNNNNNNNNCCTACCAAT 1336 ||||| |||| |||| ||||| |||| | | || || | ||| || Sbjct 2485 CTATAAACTCCCATTGAGATGGTCCTTTCCTCATTCTCTCTCAATCCTTATCCTTCC--C 2542 Query 1337 TATCCTGTTACGTGA--ATGTTGGAACGCTTCACGTAATAATTATC-CGTAACTCCTATT 1393 || ||||| |||||| | | ||||||||||||||||||||||| | ||||||| | | | Sbjct 2543 TACCCTGTCACGTGAGGAAG-TGGAACGCTTCACGTAATAATTACCTCGTAACTTCCACT 2601 Query 1394 CTTTCCCGCTTCGCAGCATTA 1414 |||||| |||| |||||||| Sbjct 2602 CTTTCCTGCTTTACAGCATTA 2622 >seq4989 Length=1177 Score = 134 bits (148), Expect = 1e-27 Identities = 129/159 (81%), Gaps = 6/159 (4%) Strand=Plus/Minus Query 995 AATTTTTTCTCGCATATTCTATACACTCACATTAAGAAGTTCCTCTCCATAATCCTTTCT 1054 ||| ||||||| ||||||||||| |||| |||| ||| | |||| ||| | || || ||| Sbjct 1173 AATCTTTTCTCACATATTCTATAAACTCCCATTGAGATGGTCCTTTCC-TCATTCTCTCT 1115 Query 1055 CAATCCTT-TCCTACCAATTATCCTGTTACGTGA-ATGTTGGAACGCTTCACGTAATAAT 1112 |||||||| |||| || || ||||| |||||| | ||||||||||||||||||||| Sbjct 1114 CAATCCTTATCCTTCC--CTACCCTGTCACGTGAGAAAGTGGAACGCTTCACGTAATAAT 1057 Query 1113 TATC-CGTAACTCCTATTCTTTCCCGCTTCACAGCATTA 1150 || | ||||||| | | ||||||| |||| ||||||||| Sbjct 1056 TACCTCGTAACTTCCACTCTTTCCTGCTTTACAGCATTA 1018 Score = 96.9 bits (106), Expect = 3e-16 Identities = 116/158 (73%), Gaps = 4/158 (3%) Strand=Plus/Minus Query 1259 AATTTTTTCTCGCATATTCTATACACTCACATTAAGATGATCCTCTTCACAATCCTTNNN 1318 ||| ||||||| ||||||||||| |||| |||| ||||| |||| | | || || | Sbjct 1173 AATCTTTTCTCACATATTCTATAAACTCCCATTGAGATGGTCCTTTCCTCATTCTCTCTC 1114 Query 1319 NNNNNNNNNCCTACCAATTATCCTGTTACGTGA-ATGTTGGAACGCTTCACGTAATAATT 1377 ||| || || ||||| |||||| | |||||||||||||||||||||| Sbjct 1113 AATCCTTATCCTTCC--CTACCCTGTCACGTGAGAAAGTGGAACGCTTCACGTAATAATT 1056 Query 1378 ATC-CGTAACTCCTATTCTTTCCCGCTTCGCAGCATTA 1414 | | ||||||| | | ||||||| |||| |||||||| Sbjct 1055 ACCTCGTAACTTCCACTCTTTCCTGCTTTACAGCATTA 1018 >seq4395 Length=14685 Score = 134 bits (148), Expect = 1e-27 Identities = 130/160 (81%), Gaps = 8/160 (5%) Strand=Plus/Minus Query 995 AATTTTTTCTCGCATATTCTATACACTCACATTAAGAAGTTCCTCTCCATAATCCTTTCT 1054 ||| ||||||| ||||||||||| |||| |||| ||| | |||| ||| | || || ||| Sbjct 3842 AATCTTTTCTCACATATTCTATAAACTCCCATTGAGATGGTCCTTTCC-TCATTCTCTCT 3784 Query 1055 CAATCCTT-TCCTACCAATTATCCTGTTACGTGA--ATGTTGGAACGCTTCACGTAATAA 1111 |||||||| |||| || || ||||| |||||| | | |||||||||||||||||||| Sbjct 3783 CAATCCTTATCCTTCC--CTACCCTGTCACGTGAGGAAG-TGGAACGCTTCACGTAATAA 3727 Query 1112 TTATC-CGTAACTCCTATTCTTTCCCGCTTCACAGCATTA 1150 ||| | ||||||| | | ||||||| |||| ||||||||| Sbjct 3726 TTACCTCGTAACTTCCACTCTTTCCTGCTTTACAGCATTA 3687 Score = 114 bits (126), Expect = 1e-21 Identities = 113/141 (80%), Gaps = 5/141 (4%) Strand=Plus/Minus Query 948 TGTCTTCGGAAGGTTCTGGGTTCGAATCCCAGTCCGAGCTATCTAATAATTTTTTCTCGC 1007 |||| ||| ||||||||||||||||||||||| |||| |||| ||| ||||||| | Sbjct 3988 TGTCATCGAAAGGTTCTGGGTTCGAATCCCAGCTCGAGTTATC-CCGAATCTTTTCTCAC 3930 Query 1008 ATATTCTATACACTCACATTAAGAAGTTCCTCTCCATAATCCTTTCTCAATCCTT-TCCT 1066 |||||||||| |||| |||| ||| | |||| ||| | || || ||||||||||| |||| Sbjct 3929 ATATTCTATAAACTCCCATTGAGATGGTCCTTTCC-TCATTCTCTCTCAATCCTTATCCT 3871 Query 1067 ACCAATTATCCTGTTACGTGA 1087 || || ||||| |||||| Sbjct 3870 TCC--CTACCCTGTCACGTGA 3852 Score = 96.9 bits (106), Expect = 3e-16 Identities = 117/159 (74%), Gaps = 6/159 (4%) Strand=Plus/Minus Query 1259 AATTTTTTCTCGCATATTCTATACACTCACATTAAGATGATCCTCTTCACAATCCTTNNN 1318 ||| ||||||| ||||||||||| |||| |||| ||||| |||| | | || || | Sbjct 3842 AATCTTTTCTCACATATTCTATAAACTCCCATTGAGATGGTCCTTTCCTCATTCTCTCTC 3783 Query 1319 NNNNNNNNNCCTACCAATTATCCTGTTACGTGA--ATGTTGGAACGCTTCACGTAATAAT 1376 ||| || || ||||| |||||| | | ||||||||||||||||||||| Sbjct 3782 AATCCTTATCCTTCC--CTACCCTGTCACGTGAGGAAG-TGGAACGCTTCACGTAATAAT 3726 Query 1377 TATC-CGTAACTCCTATTCTTTCCCGCTTCGCAGCATTA 1414 || | ||||||| | | ||||||| |||| |||||||| Sbjct 3725 TACCTCGTAACTTCCACTCTTTCCTGCTTTACAGCATTA 3687 Score = 89.7 bits (98), Expect = 5e-14 Identities = 72/86 (84%), Gaps = 1/86 (1%) Strand=Plus/Minus Query 1217 TCGGAAGGTTCTGGGTTCGAATCCCAGTCCGAGCTATCTAATAATTTTTTCTCGCATATT 1276 ||| ||||||||||||||||||||||| |||| |||| ||| ||||||| |||||| Sbjct 3983 TCGAAAGGTTCTGGGTTCGAATCCCAGCTCGAGTTATCCCG-AATCTTTTCTCACATATT 3925 Query 1277 CTATACACTCACATTAAGATGATCCT 1302 ||||| |||| |||| ||||| |||| Sbjct 3924 CTATAAACTCCCATTGAGATGGTCCT 3899 Score = 78.8 bits (86), Expect = 9e-11 Identities = 68/81 (84%), Gaps = 4/81 (5%) Strand=Plus/Minus Query 1073 TATCCTGTTACGTGA--ATGTTGGAACGCTTCACGTAATAATTATC-CGTAACTCCTATT 1129 || ||||| |||||| | || |||||||||||||||||||||| | ||||||| | | | Sbjct 3668 TACCCTGTCACGTGAGGAAGT-GGAACGCTTCACGTAATAATTACCTCGTAACTTCCACT 3610 Query 1130 CTTTCCCGCTTCACAGCATTA 1150 |||||| |||| ||||||||| Sbjct 3609 CTTTCCTGCTTTACAGCATTA 3589 >seq1468 Length=26024 Score = 118 bits (130), Expect = 1e-22 Identities = 99/120 (83%), Gaps = 1/120 (1%) Strand=Plus/Minus Query 912 ATAGACCGGATAGCTCAAATGGTAGAGTAGCCGACATGTCTTCGGAAGGTTCTGGGTTCG 971 |||||||| |||||||||| |||||| || ||||||| ||| |||||||||||||| Sbjct 10117 ATAGACCGTGTAGCTCAAATCGTAGAGCAGATGACATGTAATCGACAGGTTCTGGGTTCG 10058 Query 972 AATCCCAGTCCGAGCTATCTAATAATTTTTTCTCGCATATTCTATACACTCACATTAAGA 1031 |||||||| |||||| | | ||| ||||||| |||||||||||||||| |||| ||| Sbjct 10057 AATCCCAGCTCGAGCTGT-TCCGAATGTTTTCTCACATATTCTATACACTCCCATTGAGA 9999 Score = 82.4 bits (90), Expect = 7e-12 Identities = 64/75 (85%), Gaps = 1/75 (1%) Strand=Plus/Minus Query 1222 AGGTTCTGGGTTCGAATCCCAGTCCGAGCTATCTAATAATTTTTTCTCGCATATTCTATA 1281 |||||||||||||||||||||| |||||| | | ||| ||||||| ||||||||||| Sbjct 10071 AGGTTCTGGGTTCGAATCCCAGCTCGAGCTGT-TCCGAATGTTTTCTCACATATTCTATA 10013 Query 1282 CACTCACATTAAGAT 1296 ||||| |||| |||| Sbjct 10012 CACTCCCATTGAGAT 9998 >seq3382 Length=350 Score = 78.8 bits (86), Expect = 9e-11 Identities = 68/81 (84%), Gaps = 4/81 (5%) Strand=Plus/Minus Query 1073 TATCCTGTTACGTGA--ATGTTGGAACGCTTCACGTAATAATTATC-CGTAACTCCTATT 1129 || ||||| |||||| | || |||||||||||||||||||||| | ||||||| | | | Sbjct 267 TACCCTGTCACGTGAGGAAGT-GGAACGCTTCACGTAATAATTACCTCGTAACTTCCACT 209 Query 1130 CTTTCCCGCTTCACAGCATTA 1150 |||||| |||| ||||||||| Sbjct 208 CTTTCCTGCTTTACAGCATTA 188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 47794936576464