Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocentrus_20cingulum_20[genbank_20GCA_5F002156465.1_202017-05-22] 12,056 sequences; 127,916,415 total letters Query= NC_006637.1 Length=14489 Score E Sequences producing significant alignments: (Bits) Value seq7744 87.8 2e-13 seq1468 82.4 7e-12 >seq7744 Length=16608 Score = 87.8 bits (96), Expect = 2e-13 Identities = 58/63 (92%), Gaps = 1/63 (2%) Strand=Plus/Plus Query 7539 TAAAATCCGAACAAAAACAGTTTCACTGTaaaaaaaTCGCGACAAGTCCACGTTCATAAG 7598 ||||||||| ||||||||||||||||||| ||| || |||| |||||||||||||||||| Sbjct 11695 TAAAATCCGCACAAAAACAGTTTCACTGT-AAAGAACCGCGCCAAGTCCACGTTCATAAG 11753 Query 7599 ACT 7601 ||| Sbjct 11754 ACT 11756 Score = 80.6 bits (88), Expect = 2e-11 Identities = 54/59 (92%), Gaps = 1/59 (2%) Strand=Plus/Minus Query 9111 AGTCTTATGAACGTAGACTTGGCGCGAtttttttACAGTGAAACTGTTTTTGTTCGGAT 9169 |||||||||||||| ||||||||||| || ||| ||||||||||||||||||| ||||| Sbjct 11756 AGTCTTATGAACGTGGACTTGGCGCGGTTCTTT-ACAGTGAAACTGTTTTTGTGCGGAT 11699 >seq1468 Length=26024 Score = 82.4 bits (90), Expect = 7e-12 Identities = 83/108 (77%), Gaps = 9/108 (8%) Strand=Plus/Plus Query 7765 AAAAAATAATCTGTGGAAATGACAGATATGGGAATGTTAAATTGACAT----GGCCAGAT 7820 |||||||| | ||| ||||||||||| ||| | ||| ||| |||||| || || Sbjct 10234 AAAAAATAGTATGTAGAAATGACAGAAGTGGTATTGTCAAAATGACATCCCCTTCCCAAT 10293 Query 7821 TTTATTAGATTTACAAAGAA-----AAACTGTCAAATTTACAGAAATA 7863 ||||| ||||||||||| || ||||||||| ||||||||||||| Sbjct 10294 TTTATCAGATTTACAAAAAAAAAATAAACTGTCACATTTACAGAAATA 10341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 46239953367456