Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrocentrus_20cingulum_20[genbank_20GCA_5F002156465.1_202017-05-22]
12,056 sequences; 127,916,415 total letters
Query= NC_006644.1
Length=16103
Score E
Sequences producing significant alignments: (Bits) Value
seq10087 102 8e-18
seq1836 86.0 6e-13
>seq10087
Length=5398
Score = 102 bits (112), Expect = 8e-18
Identities = 82/99 (83%), Gaps = 0/99 (0%)
Strand=Plus/Plus
Query 14450 TTAACCCTCTCACGGTCAATTCGGACTGAGTCGTACTTTTTCTCCCGGAGTGGGGATAGC 14509
||||||||||||| | || ||||||| ||| ||||||||| |||||| ||||||||
Sbjct 4214 TTAACCCTCTCACCTTAAAGTCGGACTAAGTGGTACTTTTTTCGGCGGAGTAGGGATAGC 4273
Query 14510 CAGTCGCGTGAGCGGACTAACTCCCGCCACCAGATTTTC 14548
||||||| ||||||| |||||| |||||||||||||
Sbjct 4274 ATGTCGCGTAAGCGGACACACTCCCACCACCAGATTTTC 4312
Score = 86.0 bits (94), Expect = 6e-13
Identities = 68/82 (83%), Gaps = 0/82 (0%)
Strand=Plus/Plus
Query 14467 AATTCGGACTGAGTCGTACTTTTTCTCCCGGAGTGGGGATAGCCAGTCGCGTGAGCGGAC 14526
|| ||||||| ||| ||||||||| |||||| |||||||| ||||||| |||||||
Sbjct 4330 AAGTCGGACTAAGTGGTACTTTTTTCGGCGGAGTAGGGATAGCATGTCGCGTAAGCGGAC 4389
Query 14527 TAACTCCCGCCACCAGATTTTC 14548
|||||| |||||||||||||
Sbjct 4390 ACACTCCCACCACCAGATTTTC 4411
>seq1836
Length=2415
Score = 86.0 bits (94), Expect = 6e-13
Identities = 84/108 (78%), Gaps = 9/108 (8%)
Strand=Plus/Minus
Query 14450 TTAACCCTCTCACGGTCAATTCGGACTGAGTCGTACTTTTTC--------TCC-CGGAGT 14500
||||||||||||| | || ||||||| ||| ||||||||| || ||||||
Sbjct 2139 TTAACCCTCTCACCTTAAAGTCGGACTAAGTGGTACTTTTTTCGGCGGTTTCGGCGGAGT 2080
Query 14501 GGGGATAGCCAGTCGCGTGAGCGGACTAACTCCCGCCACCAGATTTTC 14548
|||||||| ||||||| ||||||| |||||| |||||||||||||
Sbjct 2079 AGGGATAGCATGTCGCGTAAGCGGACACACTCCCACCACCAGATTTTC 2032
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 51404033407248
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |