Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocentrus_20cingulum_20[genbank_20GCA_5F002156465.1_202017-05-22] 12,056 sequences; 127,916,415 total letters Query= NC_006660.1 Length=20197 Score E Sequences producing significant alignments: (Bits) Value seq4988 147 3e-31 seq7776 95.1 2e-15 seq10106 86.0 8e-13 seq8017 82.4 1e-11 >seq4988 Length=5228 Score = 147 bits (162), Expect = 3e-31 Identities = 239/347 (69%), Gaps = 8/347 (2%) Strand=Plus/Minus Query 9683 CTCCCAGCTCAAAAGTGTGATAGAAGTTTCATAGAACACTATTTTTGGAATTTTCAAACC 9742 |||| | ||||||| | || || |||||| ||| |||| ||||| | |||| | ||| | Sbjct 369 CTCCGAACTCAAAAATCTGGTAAAAGTTTAATATAACATTATTTCTTAAATTCTAAAATC 310 Query 9743 GCAATAACTTTTGAATGGATCAACCAATTTCCACGCGGTTGGTGCCATTCGACGCAGTTT 9802 |||| |||||||||| || |||| ||| |||||||||| ||||||||| ||||| Sbjct 309 AAAATA-CTTTTGAATGAATTAACCGTTTTTTACGCGGTTGGCATCATTCGACGTAGTTT 251 Query 9803 TATCAT-CCTCATAAGTTATTTTCAGGTTTTAATTGATCGAACCGAAAATTTCGGAGTAA 9861 | ||| |||||||| | || |||||||| ||||||| ||||||| ||| Sbjct 250 T-TCAGGCCTCATAAAGAGTCTTTGAGTTTTAATCGATCGAAGTATGAATTTCGATATAA 192 Query 9862 TCCCGNNNNNNNNNNNNNNNNNNNNNNNNNNCGTTCAC---GATATCTCTCGAACGAATC 9918 | | | | || |||| ||| || ||||| Sbjct 191 TTCAGAATAAACATTTTTTTCTGTTTTTTTTTTTCGACAATGATAACTCATAAAAGAATC 132 Query 9919 AACCGATTTTGACCAGCTTGGTGGCAATCGACGTGGTTTTTTGATGTTAAGAGCTGATTA 9978 || ||||| ||||| | | | ||| || |||||||||| |||||||| ||||||||||| Sbjct 131 AATCGATTGTGACCGGGCTAGCGGCGATTGACGTGGTTTCTTGATGTTGAGAGCTGATTA 72 Query 9979 GTTTTTGGAATTGATCGGTAGAGCTATTTAAAAGTTATTCCAAAAAA 10025 |||||||||||||||| || || ||||||||| |||| | |||| Sbjct 71 GTTTTTGGAATTGATCAGT--AGTCGTTTAAAAGTAATTCTATAAAA 27 Score = 87.8 bits (96), Expect = 2e-13 Identities = 73/88 (83%), Gaps = 1/88 (1%) Strand=Plus/Minus Query 9502 aaaaaaaaTTAG-AAAAACGGTTCACCCTAAAGGCCATCCGTGCAACTTCCCGCTAATTC 9560 ||||||||| | |||||||||| ||||||||||||||| || ||||||||| ||||| Sbjct 457 AAAAAAAATAAATAAAAACGGTTGGCCCTAAAGGCCATCCATGAAACTTCCCGTTAATTT 398 Query 9561 TATTCCTGGGCGCTAAAAATTGTACTTA 9588 ||| | ||||| ||||||||||||| Sbjct 397 TATATTTAAGCGCTCAAAATTGTACTTA 370 >seq7776 Length=24510 Score = 95.1 bits (104), Expect = 2e-15 Identities = 94/120 (78%), Gaps = 4/120 (3%) Strand=Plus/Plus Query 9910 GAACGAATCAACCGATTTTGACCAGCTTGGTGGCAATCGACGTG---GTTTTTTGATGTT 9966 |||||||||||||||| | ||| | || | |||||| |||||| ||||||| || | Sbjct 19130 GAACGAATCAACCGATGTGGACTCGGTTTGCGGCAATTGACGTGTTTGTTTTTTAAT-TC 19188 Query 9967 AAGAGCTGATTAGTTTTTGGAATTGATCGGTAGAGCTATTTAAAAGTTATTCCAAAAAAT 10026 ||||| ||||||||||| ||||||||||| ||| ||| | ||||||| ||||||| Sbjct 19189 CAGAGCCGATTAGTTTTTACAATTGATCGGTCGAGTCGTTTTAGAGTTATTTGAAAAAAT 19248 >seq10106 Length=34009 Score = 86.0 bits (94), Expect = 8e-13 Identities = 86/112 (77%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 15289 AGATATCTATGGGGCATTCCACGCCAAATCAACCACTTTTGACCCTGACCCCTTTTGATT 15348 ||| || |||||| |||||| |||||| ||||||||||| | ||||||||| |||| Sbjct 29781 AGAAATACATGGGGTATTCCATATCAAATCGACCACTTTTGAACTCGACCCCTTTAGATT 29722 Query 15349 TGGCTGAAAGTTTACCATCCTTTTCTACCCTATCAAAAACGTCTCTCATAAT 15400 | ||||||| ||| ||| ||||||||| | |||||| | | ||| ||| Sbjct 29721 TTGCTGAAACTTTTTCATTATTTTCTACCATTCGAAAAACATTTTTCAGAAT 29670 Score = 86.0 bits (94), Expect = 8e-13 Identities = 85/109 (78%), Gaps = 2/109 (2%) Strand=Plus/Plus Query 16793 TTATGAGAGACGTTTTTGATAGGGTAGAAAAGGATGGTAAACTTTCAGCCAAATCAAAAG 16852 || ||| | | |||||| | ||||||||| ||| ||| ||||||| ||||| |||| Sbjct 29671 TTCTGAAAAATGTTTTTCGAATGGTAGAAAATAATGAAAAAGTTTCAGCAAAATCTAAAG 29730 Query 16853 GGGTCAGGGTCAAAAGTGGTCGATTTGGCGTGGAATGCCCCCTATGTAT 16901 ||||| | |||||||||||||||||| |||||| |||| |||||| Sbjct 29731 GGGTCGAGTTCAAAAGTGGTCGATTTGATATGGAATACCCC--ATGTAT 29777 >seq8017 Length=23477 Score = 82.4 bits (90), Expect = 1e-11 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 9675 TTTGAGCTCTCCCAGCTCAAAAGTGTGATAGAAGTTTCATAGAACACTATTTTTGGAATT 9734 ||||||||| | ||||||||||| ||||| ||||| ||| ||||||||| | ||||| Sbjct 10883 TTTGAGCTCATCGAGCTCAAAAGTTTGATAAAAGTTGAATAAAACACTATTCATTGAATT 10824 Query 9735 TTCAAACCGCAATAACTTTTGAATGGATCAACCAATTT 9772 || |||| || ||| ||| |||| ||| ||| |||| Sbjct 10823 TTGAAACTGCCATACCTTACAAATGAATCGACCGATTT 10786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 64503007188480