Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocentrus_20cingulum_20[genbank_20GCA_5F002156465.1_202017-05-22] 12,056 sequences; 127,916,415 total letters Query= NC_007037.1 Length=15058 Score E Sequences producing significant alignments: (Bits) Value seq11749 136 4e-28 seq10646 132 5e-27 seq8000 86.0 6e-13 seq3208 84.2 2e-12 seq7559 80.6 3e-11 >seq11749 Length=20225 Score = 136 bits (150), Expect = 4e-28 Identities = 104/123 (85%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 945 GCTTCGCCAAAATTTGGGTGAATTGAGTTAAAGTTGGACGAGAGTAAATCGACTTGATGG 1004 ||||| ||||||| ||||| | ||| ||||||||| ||||||| ||| ||||||||| Sbjct 8516 GCTTCCGCAAAATTCCAGTGAAGTTAGTCAAAGTTGGATGAGAGTAGATCCACTTGATGG 8575 Query 1005 TTAAAACCCACAAAGAATAATAATCGGCTTAGGTGGGCCGTCTTGCCCCGGTCTCCCCTA 1064 |||||| ||||||| |||||||| |||||||||||||||| ||| ||||||||||| | Sbjct 8576 TTAAAAGCCACAAAAAATAATAACCGGCTTAGGTGGGCCGCTTTGACCCGGTCTCCCTTG 8635 Query 1065 CAC 1067 ||| Sbjct 8636 CAC 8638 Score = 127 bits (140), Expect = 2e-25 Identities = 127/163 (78%), Gaps = 4/163 (2%) Strand=Plus/Plus Query 537 TTTCTT-TGATTATCACAAATTCAGATTATTTACTCATTTTTAGCCCTATACGTGAAACT 595 |||||| | |||||| ||||||| | ||||| || ||||||||||| ||| | | |||| Sbjct 7164 TTTCTTCTAATTATCGCAAATTCGGGTTATTCACCCATTTTTAGCCTTATGCTTCAAACC 7223 Query 596 AGGGGCAAAATGAACCACTCAGAAATTCTaaaaaaaTATGTATTTTATATTATTATAACC 655 ||||||||||| |||| ||| ||| |||||||| | ||||||||||| |||||||| Sbjct 7224 AGGGGCAAAATCAACCTTTCAAAAA---TAAAAAAAAAGTTATTTTATATTTTTATAACC 7280 Query 656 TAGTCATGATTAATTTAATAGAAATATCATTCTTTGGTTAATT 698 || |||| |||||| || | |||| | | ||||| | ||| Sbjct 7281 TAATCATCATTAATGGAACAAAAATCTTGTATTTTGGCTGATT 7323 Score = 114 bits (126), Expect = 1e-21 Identities = 119/154 (77%), Gaps = 3/154 (2%) Strand=Plus/Plus Query 10356 ATTATCACAAATTCAGATTATTTACTCATTTTTAGCCCTATACGTGAAACTAGGGGCAAA 10415 |||||| ||||||| | ||||| || ||||||||||| ||| | | |||| ||||||||| Sbjct 7173 ATTATCGCAAATTCGGGTTATTCACCCATTTTTAGCCTTATGCTTCAAACCAGGGGCAAA 7232 Query 10416 ATGAACCACTCAGAAAATTCTaaaaaaaaTGTATTTCATATTATTATAACTTAGTCATTA 10475 || |||| ||| ||||| |||||||| ||||| ||||| ||||||| || |||| | Sbjct 7233 ATCAACCTTTCA-AAAAT--AAAAAAAAAGTTATTTTATATTTTTATAACCTAATCATCA 7289 Query 10476 TTAATTTAATAGAAATATCATTCTTTGGTTAATT 10509 ||||| || | |||| | | ||||| | ||| Sbjct 7290 TTAATGGAACAAAAATCTTGTATTTTGGCTGATT 7323 Score = 111 bits (122), Expect = 2e-20 Identities = 95/117 (81%), Gaps = 1/117 (1%) Strand=Plus/Plus Query 10758 GCTTCACCMAAATTTTGGTGAATTGAGTTAAAATTGGACGAGAGTAAATCGACTTGATGG 10817 ||||| | ||||| ||||| | ||| ||| ||||| ||||||| ||| ||||||||| Sbjct 8516 GCTTCCGCAAAATTCCAGTGAAGTTAGTCAAAGTTGGATGAGAGTAGATCCACTTGATGG 8575 Query 10818 TT-AAAGGCACAAAGAATAATAATCGGTTTAGGTGGGCCGTCTTACCCCGGTCTCCC 10873 || |||| |||||| |||||||| ||| |||||||||||| || ||||||||||| Sbjct 8576 TTAAAAGCCACAAAAAATAATAACCGGCTTAGGTGGGCCGCTTTGACCCGGTCTCCC 8632 Score = 82.4 bits (90), Expect = 7e-12 Identities = 115/159 (72%), Gaps = 2/159 (1%) Strand=Plus/Plus Query 703 TATTTGGTAATATGTTTGGaaaaa-aaTTAAAACACTCAAT-TTTTCTCTACAGAAGTGA 760 || |||||||||| ||| ||||| ||| | ||||||||| |||| | | | |||| Sbjct 8275 TACTTGGTAATATCTTTAAAAAAACAATCATTACACTCAATGTTTTTTATGTAAAAGTAG 8334 Query 761 ACAAATTACTCGTATTATATCaaaaaaaaTTATTTCGAGTAATATAAAAGTAAATACAGT 820 | | |||| || | ||||| | | ||| ||||| ||||| |||||| |||| Sbjct 8335 GGGAGCGATTCGTGGCATGTTAAAAATAGTGTTTTTAAGTAACATAAATGTAAATGCAGT 8394 Query 821 TGTCAAAGAGAAAAATATAAACATTTATGACGCGGGAAA 859 |||||||||||| |||| ||| |||| | ||| || ||| Sbjct 8395 TGTCAAAGAGAAGAATAAAAATATTTCTAACGTGGAAAA 8433 >seq10646 Length=17082 Score = 132 bits (146), Expect = 5e-27 Identities = 102/121 (84%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 944 AGCTTCGCCAAAATTTGGGTGAATTGAGTTAAAGTTGGACGAGAGTAAATCGACTTGATG 1003 |||||| ||||||| ||||| | ||| || ||||||||| |||||||| |||||||| Sbjct 12170 AGCTTCCGCAAAATTCCAGTGAAATTAGTCAATGTTGGACGAAAGTAAATCCACTTGATG 12229 Query 1004 GTTAAAACCCACAAAGAATAATAATCGGCTTAGGTGGGCCGTCTTGCCCCGGTCTCCCCT 1063 |||||| ||||||| ||| |||| |||||||||||||||| ||||||||||||||| | Sbjct 12230 GTTAAATGCCACAAAAAATTATAACCGGCTTAGGTGGGCCGCTTTGCCCCGGTCTCCCTT 12289 Query 1064 A 1064 | Sbjct 12290 A 12290 Score = 114 bits (126), Expect = 1e-21 Identities = 101/122 (83%), Gaps = 7/122 (6%) Strand=Plus/Plus Query 537 TTTCTT-TGATTATCACAAATTCAGATTATTTACTCATTTTTAGCCCTATACGTGAAACT 595 |||||| | |||||| ||||||| | |||||||| ||||||||||| ||| | | |||| Sbjct 11198 TTTCTTCTAATTATCGCAAATTCGGGTTATTTACCCATTTTTAGCCTTATGCTTCAAACC 11257 Query 596 AGGGGCAAAATGAACCACTCAGAAATTCTaaaaaaaTATGTATTTTATATTATTATAACC 655 ||||||||||||||||||||| |||| |||||| || |||||||||| ||||| || Sbjct 11258 AGGGGCAAAATGAACCACTCA-AAAT----AAAAAAAGTG-ATTTTATATTTTTATATCC 11311 Query 656 TA 657 || Sbjct 11312 TA 11313 Score = 114 bits (126), Expect = 1e-21 Identities = 99/122 (81%), Gaps = 1/122 (1%) Strand=Plus/Plus Query 10757 AGCTTCACCMAAATTTTGGTGAATTGAGTTAAAATTGGACGAGAGTAAATCGACTTGATG 10816 |||||| | ||||| ||||| | ||| || |||||||| |||||||| |||||||| Sbjct 12170 AGCTTCCGCAAAATTCCAGTGAAATTAGTCAATGTTGGACGAAAGTAAATCCACTTGATG 12229 Query 10817 GTTAAA-GGCACAAAGAATAATAATCGGTTTAGGTGGGCCGTCTTACCCCGGTCTCCCCT 10875 |||||| | |||||| ||| |||| ||| |||||||||||| || |||||||||||| | Sbjct 12230 GTTAAATGCCACAAAAAATTATAACCGGCTTAGGTGGGCCGCTTTGCCCCGGTCTCCCTT 12289 Query 10876 AT 10877 || Sbjct 12290 AT 12291 Score = 105 bits (116), Expect = 6e-19 Identities = 89/108 (82%), Gaps = 6/108 (6%) Strand=Plus/Plus Query 10356 ATTATCACAAATTCAGATTATTTACTCATTTTTAGCCCTATACGTGAAACTAGGGGCAAA 10415 |||||| ||||||| | |||||||| ||||||||||| ||| | | |||| ||||||||| Sbjct 11207 ATTATCGCAAATTCGGGTTATTTACCCATTTTTAGCCTTATGCTTCAAACCAGGGGCAAA 11266 Query 10416 ATGAACCACTCAGAAAATTCTaaaaaaaaTGTATTTCATATTATTATA 10463 |||||||||||| || |||||||| || |||| ||||| ||||| Sbjct 11267 ATGAACCACTCAAAA-----TAAAAAAAGTG-ATTTTATATTTTTATA 11308 >seq8000 Length=3469 Score = 86.0 bits (94), Expect = 6e-13 Identities = 88/114 (77%), Gaps = 1/114 (1%) Strand=Plus/Plus Query 937 TTTCAGGAGCTTCGCCAAAATTTGGGTGAATTGAGTTAAAGTTGGACGAGAGTAAATCGA 996 |||| ||| ||||| ||||| | | ||| || ||| || || | |||||||| | Sbjct 3161 TTTC-GGACCTTCGGTGAAATTCCGATAAATCTAGCCGAAGATGAACAAAAGTAAATCTA 3219 Query 997 CTTGATGGTTAAAACCCACAAAGAATAATAATCGGCTTAGGTGGGCCGTCTTGC 1050 | |||||||| ||| ||||| | |||||||| |||||||||| ||||||||||| Sbjct 3220 CCTGATGGTTCAAAGCCACATAAAATAATAACCGGCTTAGGTAGGCCGTCTTGC 3273 >seq3208 Length=2467 Score = 84.2 bits (92), Expect = 2e-12 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 975 AAGTTGGACGAGAGTAAATCGACTTGATGGTTAAAACCCACAAAGAATAATAATCGGCTT 1034 ||| || || | |||||||| || |||||||| ||| ||||| | |||||||| |||||| Sbjct 586 AAGATGAACAAAAGTAAATCTACCTGATGGTTCAAAGCCACATAAAATAATAACCGGCTT 645 Query 1035 AGGTGGGCCGTCTTGC 1050 |||| ||||||||||| Sbjct 646 AGGTAGGCCGTCTTGC 661 >seq7559 Length=7772 Score = 80.6 bits (88), Expect = 3e-11 Identities = 56/64 (88%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 987 AGTAAATCGACTTGATGGTTAAAACCCACAAAGAATAATAATCGGCTTAGGTGGGCCGTC 1046 |||||||| || |||||||| ||| ||||| | |||||||| |||||||||| ||||||| Sbjct 3096 AGTAAATCTACCTGATGGTTCAAAGCCACATAAAATAATAACCGGCTTAGGTAGGCCGTC 3155 Query 1047 TTGC 1050 |||| Sbjct 3156 TTGC 3159 Lambda K H 0.634 0.408 0.913 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 48060499552488