Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocentrus_20cingulum_20[genbank_20GCA_5F002156465.1_202017-05-22] 12,056 sequences; 127,916,415 total letters Query= NC_007044.1 Length=34334 Score E Sequences producing significant alignments: (Bits) Value seq1468 89.7 1e-13 >seq1468 Length=26024 Score = 89.7 bits (98), Expect = 1e-13 Identities = 103/135 (76%), Gaps = 4/135 (3%) Strand=Plus/Minus Query 1812 TACCGTACGATGGACGGTGTGGCTCAATAAGTTATAGTAAAATTGAACGGAATATAGTAT 1871 ||||||| |||||||||||||||||||| || ||||| | || |||| |||| | || Sbjct 10172 TACCGTAAGATGGACGGTGTGGCTCAAT-AGATATAGAATAAGTGAAGGGAACTT--CAT 10116 Query 1872 AGTGCCGGATAGCTCAACTGGTAGAGCACTCGGCGCGATACCGACATGGTCTGGGTTCGA 1931 || ||| |||||||| | |||||||| | | | | ||||| | ||||||||||| Sbjct 10115 AG-ACCGTGTAGCTCAAATCGTAGAGCAGATGACATGTAATCGACAGGTTCTGGGTTCGA 10057 Query 1932 TTCCCAGTTCGGGCT 1946 |||||| ||| ||| Sbjct 10056 ATCCCAGCTCGAGCT 10042 Score = 87.8 bits (96), Expect = 4e-13 Identities = 104/136 (76%), Gaps = 5/136 (4%) Strand=Plus/Minus Query 24413 TACCGTACGATGGACGGTGTGGCTCAATAAGTTATAGATAAAATTGAACGGAATATAGTA 24472 ||||||| |||||||||||||||||||| || |||||| | || |||| |||| | | Sbjct 10172 TACCGTAAGATGGACGGTGTGGCTCAAT-AGATATAGA-ATAAGTGAAGGGAACTT--CA 10117 Query 24473 TAGTGCCGGATAGCTCAACTGGTAGAGCACTCGGCGCGATACCGACATGGTCTGGGTTCG 24532 ||| ||| |||||||| | |||||||| | | | | ||||| | |||||||||| Sbjct 10116 TAG-ACCGTGTAGCTCAAATCGTAGAGCAGATGACATGTAATCGACAGGTTCTGGGTTCG 10058 Query 24533 ATTCCCAGTTCGGGCT 24548 | |||||| ||| ||| Sbjct 10057 AATCCCAGCTCGAGCT 10042 Score = 87.8 bits (96), Expect = 4e-13 Identities = 104/136 (76%), Gaps = 5/136 (4%) Strand=Plus/Minus Query 24190 TACCGTACGATGGACGGTGTGGCTCAATAAGTTATAGATAAAATTGAACGGAATATAGTA 24249 ||||||| |||||||||||||||||||| || |||||| | || |||| |||| | | Sbjct 10172 TACCGTAAGATGGACGGTGTGGCTCAAT-AGATATAGA-ATAAGTGAAGGGAACTT--CA 10117 Query 24250 TAGTGCCGGATAGCTCAACTGGTAGAGCACTCGGCGCGATACCGACATGGTCTGGGTTCG 24309 ||| ||| |||||||| | |||||||| | | | | ||||| | |||||||||| Sbjct 10116 TAG-ACCGTGTAGCTCAAATCGTAGAGCAGATGACATGTAATCGACAGGTTCTGGGTTCG 10058 Query 24310 ATTCCCAGTTCGGGCT 24325 | |||||| ||| ||| Sbjct 10057 AATCCCAGCTCGAGCT 10042 Score = 87.8 bits (96), Expect = 4e-13 Identities = 104/136 (76%), Gaps = 5/136 (4%) Strand=Plus/Minus Query 9040 TACCGTACGATGGACGGTGTGGCTCAATAAGTTATAGATAAAATTGAACGGAATATAGTA 9099 ||||||| |||||||||||||||||||| || |||||| | || |||| |||| | | Sbjct 10172 TACCGTAAGATGGACGGTGTGGCTCAAT-AGATATAGA-ATAAGTGAAGGGAACTT--CA 10117 Query 9100 TAGTGCCGGATAGCTCAACTGGTAGAGCACTCGGCGCGATACCGACATGGTCTGGGTTCG 9159 ||| ||| |||||||| | |||||||| | | | | ||||| | |||||||||| Sbjct 10116 TAG-ACCGTGTAGCTCAAATCGTAGAGCAGATGACATGTAATCGACAGGTTCTGGGTTCG 10058 Query 9160 ATTCCCAGTTCGGGCT 9175 | |||||| ||| ||| Sbjct 10057 AATCCCAGCTCGAGCT 10042 Score = 87.8 bits (96), Expect = 4e-13 Identities = 104/136 (76%), Gaps = 5/136 (4%) Strand=Plus/Minus Query 1589 TACCGTACGATGGACGGTGTGGCTCAATAAGTTATAGATAAAATTGAACGGAATATAGTA 1648 ||||||| |||||||||||||||||||| || |||||| | || |||| |||| | | Sbjct 10172 TACCGTAAGATGGACGGTGTGGCTCAAT-AGATATAGA-ATAAGTGAAGGGAACTT--CA 10117 Query 1649 TAGTGCCGGATAGCTCAACTGGTAGAGCACTCGGCGCGATACCGACATGGTCTGGGTTCG 1708 ||| ||| |||||||| | |||||||| | | | | ||||| | |||||||||| Sbjct 10116 TAG-ACCGTGTAGCTCAAATCGTAGAGCAGATGACATGTAATCGACAGGTTCTGGGTTCG 10058 Query 1709 ATTCCCAGTTCGGGCT 1724 | |||||| ||| ||| Sbjct 10057 AATCCCAGCTCGAGCT 10042 Score = 84.2 bits (92), Expect = 5e-12 Identities = 102/136 (75%), Gaps = 5/136 (4%) Strand=Plus/Minus Query 8817 TACCGTACGATGGACGATGTGGCTCAATAAGTTATAGATAAAATTGAACGGAATATAGTA 8876 ||||||| |||||||| |||||||||||| | |||||| | || |||| |||| | || Sbjct 10172 TACCGTAAGATGGACGGTGTGGCTCAATA-GATATAGA-ATAAGTGAAGGGAACTTCATA 10115 Query 8877 TAGTGCCGGATAGCTCAACTGGTAGAGCACTCGGCGCGATACCGACATGGTCTGGGTTCG 8936 | ||| |||||||| | |||||||| | | | | ||||| | |||||||||| Sbjct 10114 GA---CCGTGTAGCTCAAATCGTAGAGCAGATGACATGTAATCGACAGGTTCTGGGTTCG 10058 Query 8937 ATTCCCAGTTCGGGCT 8952 | |||||| ||| ||| Sbjct 10057 AATCCCAGCTCGAGCT 10042 Score = 80.6 bits (88), Expect = 6e-11 Identities = 102/136 (75%), Gaps = 6/136 (4%) Strand=Plus/Minus Query 9263 TACCGTACGATGGACGGTG-GGCTCAATAAGTTATAGATAAAATTGAACGGAATATAGTA 9321 ||||||| ||||||||||| ||||||||| | |||||| | || |||| |||| | || Sbjct 10172 TACCGTAAGATGGACGGTGTGGCTCAATA-GATATAGA-ATAAGTGAAGGGAACTTCATA 10115 Query 9322 TAGTGCCGGATAGCTCAACTGGTAGAGCACTCGGCGCGATACCGACATGGTCTGGGTTCG 9381 | ||| |||||||| | |||||||| | | | | ||||| | |||||||||| Sbjct 10114 GA---CCGTGTAGCTCAAATCGTAGAGCAGATGACATGTAATCGACAGGTTCTGGGTTCG 10058 Query 9382 ATTCCCAGTTCGGGCT 9397 | |||||| ||| ||| Sbjct 10057 AATCCCAGCTCGAGCT 10042 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 109731488042112