Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocentrus_20cingulum_20[genbank_20GCA_5F002156465.1_202017-05-22] 12,056 sequences; 127,916,415 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq1868 116 4e-21 seq2109 114 1e-20 seq11508 100 3e-16 seq1005 82.4 7e-11 >seq1868 Length=114019 Score = 116 bits (128), Expect = 4e-21 Identities = 200/288 (69%), Gaps = 2/288 (1%) Strand=Plus/Minus Query 71655 AATTCGAGCATAATCAAACGCATGATGAACTATGGAATGCTGCTCAGCGACAGCTAC-GC 71713 |||| ||| | ||| ||||| || || || ||||| || || ||| ||||| || Sbjct 69727 AATTTGAGAAAGCTCACACGCACGAGGATCTCTGGAACGCGGCGCAGAACCAGCTGGTGC 69668 Query 71714 AATGAGGGTAAAATTCACGGATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGG 71773 | || || ||||| ||||| | | | |||||||| ||||| ||||| |||||||||||| Sbjct 69667 GA-GAAGGCAAAATGCACGGTTTCATGCGCATGTATTGGGCGAAAAAAATTCTCGAGTGG 69609 Query 71774 ACTCAAACTCCCGAGCAGGCGCTCGAGTATTCTATTTATCTAAACGATAGATACAGTCTC 71833 | ||||||||||| |||| | | | ||||| || ||||| | |||||| | Sbjct 69608 TCAAAAACTCCCGAGGAGGCCTTGGCAACGGCAATTTACCTCAACGACAAGTACAGTATG 69549 Query 71834 GACGGTCGCGATCCTAACGGTTATGTCGGTTGCATGTGGAGCATTTGCGGTCTTCACGAT 71893 || || | ||||| || || || || || ||||||||| ||||| || | ||||| Sbjct 69548 GATGGCAGGGATCCAAATGGATACGTAGGCTGCATGTGGTCAATTTGTGGCATCCACGAC 69489 Query 71894 AGAAGCTTTTTAGAACGTCAAGTGTTTGGTAAAATTCGCTATATGAAT 71941 | ||| || || | | ||||| || ||||| || |||||| Sbjct 69488 ATGGGCTGGAAGGAGCGAGAGATTTTTGGCAAGATTCGATACATGAAT 69441 >seq2109 Length=239337 Score = 114 bits (126), Expect = 1e-20 Identities = 698/1096 (64%), Gaps = 39/1096 (4%) Strand=Plus/Minus Query 147114 ACGGTGAATTGAATCGTGTTTGCTGCGGGTTTGGTTCTCAAATAGTACATGCCCGTTTTT 147173 ||||||||||||| | || || || ||||| | || ||||| |||||||| ||||| Sbjct 131218 ACGGTGAATTGAAGTGCATTAGCCGCAGGTTTTGATCGTAAATAATACATGCCGGTTTTA 131159 Query 147174 AAACCCTTTTCCCAAGAATAGTCGTGAATGGATGATAAAACTTTATAGGT-TGGATTG-G 147231 | ||| ||||| | || || || |||| || ||| | | | | | ||| | Sbjct 131158 AGACCAAGATCCCATGCGTAAAAATGCATCGATGTCAA--CTTGCTCGTTGTAGGTTGTG 131101 Query 147232 CCACAAAAAGATTGAGCGATTGGCTCTGATCGATGTAAGGTCCCCGCTCTGCGGCCATGT 147291 ||| || ||| ||||| || ||| || || | | ||| || || || ||||| | Sbjct 131100 CCATGTGAACATTCAGCGACTGAGACTGGTCAATAAAGGCTCCACGATCAGCTGCCATTT 131041 Query 147292 CCAACACTACTTTTTGTTTAATTTCCCAAGCGGTCTTGAAGAGCGCCTTGATATTGTGTG 147351 | | |||||| |||||||||| | || ||| | | | | ||||| | || | Sbjct 131040 TTAGAATAGTTTTTTGCGAAATTTCCCAAACAGTTTTGTACAACTCTTTGATTTCGTCGG 130981 Query 147352 GAATTTCATCAATATTTTGTACAGATCCGTTGTTTTTAATAATTTTTATCATGATATCT- 147410 ||||| | | || | || || || || || || ||| | || || | ||||| Sbjct 130980 GAATTCCGTTGATTTCCTGCACTGAACCATTTTTAGCAATCAATTCATTCCTCATATCAT 130921 Query 147411 -GTCGAATATA-CGTTGGTGTCTACGAGTTTATCGACGAGATGCTGATTGACCACTTGAT 147468 ||| | | || || || | | | || | |||||| | || | | ||| Sbjct 130920 CGTCCCAGAGGTCGAGCTTGATTA--AATCTCTCAA-GAGATGAGGGTTAATGATTTGGA 130864 Query 147469 ACTCGCCCGACAGAACTCTTCGTACGTACAAATTACTAGTAAACGGCTCGAACGACTCGT 147528 | ||||| || || |||| || ||||| | ||| || || |||| ||||| ||||||| Sbjct 130863 ATTCGCCTGAGAGTACTCGACGCACGTAGATATTGCTTGTGTACGGTTCGAAAGACTCGT 130804 Query 147529 TGTTACCTAGAATCTGTGCAGTCGTTGCCGTCGGCATGTAAGCAATCAATAATGAATTGC 147588 |||| || | |||||| ||||||| ||||| ||||| ||| | || | |||||| | Sbjct 130803 TGTTGCCCATAATCTGCGCAGTCGAGGCCGTAGGCATAGGAGCGAGCAGAAGTGAATTTC 130744 Query 147589 GTAAGCCGTGCATAGCCATTTCTCGCTTAAGCTCGTCCCAGTTCCAAAGATCATTCGATT 147648 | ||||||| || |||| | ||| | | |||||| ||| | || ||| Sbjct 130743 TCACGCCGTGCTGGGCGATTTTTTCCTTCAATTTAGCCCAGTCCCACATGTC---CGAGG 130687 Query 147649 GGTTAATATTCCACAAATCAAACTGTAAAAGTCCACAACTTGCAGGGCTTCCATCGTAAG 147708 | | | ||||| ||| |||| | || || || ||||| || || |||| Sbjct 130686 GCACCACGTCCCACATATCGTACTGGAGAATACCTTTGCTCACAGGGGAACCTTCATAAG 130627 Query 147709 AATCGTATGTTCCGTGCAGTTTAGCTAGTTCGATACTTTGACTTAGTGCACCATAATAAA 147768 || || || || | || || || || ||| | || || || || || | Sbjct 130626 TCTCATAAGTGCCTTTTTCCTTCGCGAGCTCACAACTCTCCTCGAGCGCGCCGTAGTACA 130567 Query 147769 TAGTTTCTGAAATCTTTTTATTTAAATCTCT-AGCCTCTTGGCTGTCGTAGGGCATATC- 147826 | || || |||| | | || | | ||| ||| |||| ||| || | || ||||| Sbjct 130566 TCGTCTCAAAAAT-TAGCTTGTTGAGTTTCTGAGCTTCTTCGCTCTCAAATGG-ATATCG 130509 Query 147827 CAAAATGGCGAACGTATCCGCAAGTCCTTGAATACCGATACCGATGGGTCGGTGTCTGAA 147886 || | | |||| ||| ||||| || ||||| || ||||| ||||||||||| | || Sbjct 130508 CAGGAGGAGAAACGCATCAGCAAGACCCTGAATTCCAATACCAATGGGTCGGTGAC-GA- 130451 Query 147887 ATTCGATGCTTGAGCGCT-AGC------CAACGGATAAAAATTCAAGTCGATAATTTTAT 147939 || | ||||||||| ||| || || ||| ||| | ||||||| ||||| Sbjct 130450 ---CG--GTTTGAGCGCTCAGCTTCCGGTAATGGGTAACGATTTACATCGATAACTTTAT 130396 Query 147940 TGAGATTATTGGTAACCACTCTAGATACATTG--TAGAGCGACTTAAAGTCGAAGCTTTT 147997 | ||| | || || | ||| | |||| | |||| | |||||| || | || Sbjct 130395 CTAAATTTCTTGTGACAATTCTCG--TGATTGCCTTGAGCTTTTCAAAGTCAAAAGTCTT 130338 Query 147998 AAACTGTTTATTGGCAAAATTATTTACGGCAATCGAGGCCAAGTTACACACGGCCGTTTC 148057 || ||| |||| ||||||| ||||| || || | ||||| || || ||| Sbjct 130337 CGCCTCAGGATTCACAAACATATTTACAGCAATAGAAGCAAGATTACAAACCGCGACTTC 130278 Query 148058 -TC-GATTGTCGCTATATTGAACGATTTCGGCACACAGATTGCTGTTTCGAATCACTCCC 148115 || || | ||| | || || | |||||| | |||| ||||||| || |||| |||| Sbjct 130277 ATCTGAAT-TCG-TGTACTGGATGATTTCTGTGCACAAATTGCTGCTTGAAATCGTTCCC 130220 Query 148116 TCGtttttttGATTATTTTTATTGTTAACGTGATCTTTAAACATCATGTATGGAGCTCCG 148175 ||| | || || |||| ||| || || || | | ||||||||| | ||| Sbjct 130219 AAGTTCTGCTGGTTGGATTTACGATTACAATGGTCCTTGTAGAGCATGTATGGCGTTCCA 130160 Query 148176 GTCTCGACTTGAGTCT 148191 || ||||| |||| || Sbjct 130159 GTTTCGACCTGAGACT 130144 >seq11508 Length=54009 Score = 100 bits (110), Expect = 3e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 ||||||| | ||||||||||| | || || ||| | |||||| |||| | || | Sbjct 27610 AATGCAAATCTTTGTAAAAACCCTCACGGGTAAAACCATCACCCTCGAGGTCGAGGCCTC 27551 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 || || ||||| | ||||| || ||| |||||||| || || || || ||||| Sbjct 27550 GGATACGATCGAAAATGTCAAGGCCAAAATTCAAGACAAAGAGGGCATCCCACCGGATCA 27491 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 ||| |||| |||| || || ||||| ||||| |||| | | | || |||||| || Sbjct 27490 ACAGCGACTAATTTTCGCTGGTAAACAGCTCGAGGATGGTCGCACTCTCTCCGACTACAA 27431 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 ||| || || || || ||| ||||||| || || Sbjct 27430 CATCCAGAAGGAGTCCACTCTCCATCTCGTTCT 27398 Score = 100 bits (110), Expect = 3e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 |||||| | ||||| ||||| | || || || | ||||| | ||| | || | Sbjct 27838 AATGCAGATCTTTGTCAAAACCCTCACGGGCAAGACCATCACTCTGGAAGTTGAGGCTTC 27779 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 |||||| |||||| | |||||| ||||| ||||| ||||| || || || || || Sbjct 27778 CGACACAATCGAGAATGTCAAAGCTAAGATCCAGGACAAGGAAGGCATCCCACCAGACCA 27719 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 || |||| |||| || ||| || || ||||| || | |||| | | ||||| || Sbjct 27718 GCAGCGACTGATTTTCGCCGGAAAGCAGCTCGAGGACGGCAGAACCCTGTCGGACTACAA 27659 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 ||| |||||||| || || ||||||||||||| Sbjct 27658 CATCCAAAAAGAGTCGACCCTCCATCTGGTCCT 27626 Score = 86.0 bits (94), Expect = 6e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || ||||| | || || ||| | |||||| | || | || | Sbjct 27381 ATGCAGATTTTCGTCAAAACCCTCACGGGTAAAACCATCACCCTTGAGGTTGAGGCCTCT 27322 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| |||||| | || || ||||| |||||||| || || || || || || Sbjct 27321 GACACGATCGAGAACGTAAAGGCGAAGATCCAGGACAAAGAGGGCATCCCACCAGACCAG 27262 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || |||| |||| || ||| || || ||||| || | |||| | | ||||| ||| Sbjct 27261 CAGCGACTGATTTTCGCCGGAAAGCAGCTCGAGGACGGCAGAACCCTGTCGGACTACAAC 27202 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 || |||||||| || || ||||||||||||| Sbjct 27201 ATCCAAAAAGAGTCGACCCTCCATCTGGTCCT 27170 >seq1005 Length=228466 Score = 82.4 bits (90), Expect = 7e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 ||||||| | ||||| |||||||| ||||| || | || ||| | ||| | || | Sbjct 172196 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCTTGGAAGTTGAGGCCTC 172255 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 |||| ||||||| | ||||| ||||| ||||| || || || || || || || Sbjct 172256 TGACAGCATCGAGAACGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCA 172315 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 || || | || | | || |||||||||||||||| | | | ||||| || Sbjct 172316 GCAGCGATTGATCTTTGCGGGTAAACAACTCGAAGATGGCCGCACTCTGTCTGACTACAA 172375 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 |||||| || || || || | ||| ||||||| ||||| | || || Sbjct 172376 CATTCAGAAGGAGTCGACCCTTCATTTGGTCCTTCGACTTCGTGGCGG 172423 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478590265576320