Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocentrus_20cingulum_20[genbank_20GCA_5F002156465.1_202017-05-22] 12,056 sequences; 127,916,415 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq1005 109 5e-19 seq11508 100 2e-16 seq2569 87.8 2e-12 >seq1005 Length=228466 Score = 109 bits (120), Expect = 5e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 ||||||| | ||||| |||||||| ||||| || | |||||| | ||||| |||||| Sbjct 172196 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCTTGGAAGTTGAGGCCTC 172255 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 |||| ||||||| | ||||| ||||| ||||| || ||||| || || || || Sbjct 172256 TGACAGCATCGAGAACGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCA 172315 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 ||| || |||| | | || || ||||||||||||| | | | | || || || Sbjct 172316 GCAGCGATTGATCTTTGCGGGTAAACAACTCGAAGATGGCCGCACTCTGTCTGACTACAA 172375 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGT 24199 |||||| || || || || ||||||| || Sbjct 172376 CATTCAGAAGGAGTCGACCCTTCATTTGGT 172405 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| ||||| | ||||| ||| | ||||| |||| ||||||||| | Sbjct 171969 ATGCAGATCTTTGTCAAAACTCTGACTGGTAAAACAATTACTCTCGAGGTCGAGGCCTCC 172028 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| || || | ||||| || || ||||| || || || || || || || Sbjct 172029 GACACTATTGAAAACGTCAAGGCCAAAATCCAGGACAAGGAGGGAATCCCACCAGACCAG 172088 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| || |||| | | || || ||||||||||||| | | | | | || || ||| Sbjct 172089 CAGCGATTGATCTTTGCGGGTAAACAACTCGAAGATGGCCGCACCCTGTCTGACTACAAC 172148 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218 ||||| || || || || | ||||| || || | || | |||||| Sbjct 172149 ATTCAGAAGGAGTCGACCCTGCATTTGGTCTTGCGTCTGCGTGGAGGA 172196 >seq11508 Length=54009 Score = 100 bits (110), Expect = 2e-16 Identities = 117/158 (74%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 ||||||| | ||||||||||| | || || ||| | || ||| |||| ||||||||| Sbjct 27610 AATGCAAATCTTTGTAAAAACCCTCACGGGTAAAACCATCACCCTCGAGGTCGAGGCCTC 27551 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 || || ||||| | ||||| || ||| |||||||| ||||| || || ||||| Sbjct 27550 GGATACGATCGAAAATGTCAAGGCCAAAATTCAAGACAAAGAGGGCATCCCACCGGATCA 27491 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATG 24147 |||| |||| |||| || || || || ||||| |||| Sbjct 27490 ACAGCGACTAATTTTCGCTGGTAAACAGCTCGAGGATG 27453 >seq2569 Length=108685 Score = 87.8 bits (96), Expect = 2e-12 Identities = 116/161 (72%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046 || ||||||| | ||||| ||||| |||| || || | || ||| |||| |||||||| Sbjct 43267 CACAATGCAAATCTTTGTGAAAACTCTAACGGGTAAGACCATCACCCTCGAGGTCGAGGC 43208 Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106 ||||||||||| | ||||| ||||| |||||||| || || || || || Sbjct 43207 TTCAGACACCATCGAAAATGTCAAGGCCAAGATCCAGGACAAAGAGGGAATTCCCCCAGA 43148 Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATG 24147 ||| ||| || |||||| || || || || || || |||| Sbjct 43147 TCAGCAGCGATTGATTTTCGCTGGAAAACAGCTGGAGGATG 43107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429872828428680