Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocentrus_20cingulum_20[genbank_20GCA_5F002156465.1_202017-05-22] 12,056 sequences; 127,916,415 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq1005 102 7e-17 seq11508 96.9 3e-15 >seq1005 Length=228466 Score = 102 bits (112), Expect = 7e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| || ||||||||||| || || || ||||| ||||| |||| ||| || | Sbjct 171969 ATGCAGATCTTTGTCAAAACTCTGACTGGTAAAACAATTACTCTCGAGGTCGAGGCCTCC 172028 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 |||||| ||| | | || || ||||| || || || || |||| || ||| Sbjct 172029 GACACTATTGAAAACGTCAAGGCCAAAATCCAGGACAAGGAGGGAATCCCACCAGACCAG 172088 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 || || | || | |||||| |||||| | ||||||| | ||| || | || || ||| Sbjct 172089 CAGCGATTGATCTTTGCGGGTAAACAACTCGAAGATGGCCGCACCCTGTCTGACTACAAC 172148 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514 ||||| || ||||| || | ||| |||| ||| | |||| ||||||| Sbjct 172149 ATTCAGAAGGAGTCGACCCTGCATTTGGTCTTGCGTCTGCGTGGAGGAA 172197 >seq11508 Length=54009 Score = 96.9 bits (106), Expect = 3e-15 Identities = 161/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| ||||| |||||||| |||||||| |||||||| ||| | || ||| || Sbjct 27381 ATGCAGATTTTCGTCAAAACCCTCACGGGTAAAACCATCACCCTTGAGGTTGAGGCCTCT 27322 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| | | || || ||||| || || || ||||| ||| |||| || || Sbjct 27321 GACAC-GATCGAGAACGTAAAGGCGAAGATCCAGGACAAAGAGGGCATCCCACCAGACCA 27263 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||| |||| |||| || || || || | || || | || |||| || | || || || Sbjct 27262 GCAGCGACTGATTTTCGCCGGAAAGCAGCTCGAGGACGGCAGAACCCTGTCGGACTACAA 27203 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514 ||| ||||||||||| || | ||| |||| | | |||||||| |||| Sbjct 27202 CATCCAAAAAGAGTCGACCCTCCATCTGGTCCTCCGTTTGCGAGGTGGAA 27153 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 |||||| || ||||||||||| |||||||| || ||||| || | ||| ||| | Sbjct 27838 AATGCAGATCTTTGTCAAAACCCTCACGGGCAAGACCATCACTCTGGAAGTTGAGGCTTC 27779 Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 |||||| | | | || ||| || || || || |||||| |||| || || Sbjct 27778 CGACACAATCGAGAATGTCAAAGCTAAGATCCAGGACAAGGAAGGCATCCCACCAGACCA 27719 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||| |||| |||| || || || || | || || | || |||| || | || || || Sbjct 27718 GCAGCGACTGATTTTCGCCGGAAAGCAGCTCGAGGACGGCAGAACCCTGTCGGACTACAA 27659 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514 ||| ||||||||||| || | ||| |||| | | |||||||| |||| Sbjct 27658 CATCCAAAAAGAGTCGACCCTCCATCTGGTCCTCCGTTTGCGAGGTGGAA 27609 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425281503142720