Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocentrus_20cingulum_20[genbank_20GCA_5F002156465.1_202017-05-22] 12,056 sequences; 127,916,415 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq11508 113 4e-20 seq1005 113 4e-20 >seq11508 Length=54009 Score = 113 bits (124), Expect = 4e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| ||| || || ||||| ||||| ||||||||||| | || |||| || ||||| Sbjct 27170 AGGACCAGATGGAGGGTCGACTCTTTTTGGATGTTGTAGTCCGACAGGGTTCTGCCGTCC 27229 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 || | || || || || |||| || ||||| ||||| || | |||||||||||| Sbjct 27230 TCGAGCTGCTTTCCGGCGAAAATCAGTCGCTGCTGGTCTGGTGGGATGCCCTCTTTGTCC 27289 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 || | | ||| || | | | ||||| || ||| || | |||||||||| Sbjct 27290 TGGATCTTCGCCTTTACGTTCTCGATCGTGTCAGAGGCCTCAACCTCAAGGGTGATGGTT 27349 Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || || || || |||||||| ||||||||||| Sbjct 27350 TTACCCGTGAGGGTTTTGACGAAAATCTGCAT 27381 Score = 104 bits (114), Expect = 2e-17 Identities = 153/215 (71%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| ||| || || ||||| ||||| ||||||||||| | || |||| || ||||| Sbjct 27626 AGGACCAGATGGAGGGTCGACTCTTTTTGGATGTTGTAGTCCGACAGGGTTCTGCCGTCC 27685 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 || | || || || || |||| || ||||| ||||| || | ||| || ||||| Sbjct 27686 TCGAGCTGCTTTCCGGCGAAAATCAGTCGCTGCTGGTCTGGTGGGATGCCTTCCTTGTCC 27745 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || ||| || || | | | |||||| | ||| ||||| ||||||| Sbjct 27746 TGGATCTTAGCT--TTGACATTCTCGATTGTGTCGGAAGCCTCAACTTCCAGAGTGATGG 27803 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 | || || || || ||||||||||| ||||||||| Sbjct 27804 TCTTGCCCGTGAGGGTTTTGACAAAGATCTGCATT 27838 Score = 104 bits (114), Expect = 2e-17 Identities = 162/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || ||||| || | ||| |||| ||| || ||||||||||| || ||||||||||||| Sbjct 27839 CCACCTCGGAGACGCAGAACCAAATGAAGGGTGGACTCCTTCTGAATGTTGTAGTCGGAG 27898 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | ||||||| | || || || ||| | || || |||||||| ||| || Sbjct 27899 AGAGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAAGATCAGTCGCTGTTGATCCGGTGGG 27958 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||| || ||||| || ||||| ||| || | | | ||||| | ||| Sbjct 27959 ATGCCTTCCTTGTCCTGGATCTTTGC--CTTGACGTTCTCAATCGTGTCCGACGCCTCGA 28016 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 || | ||||||||| || ||||| || ||||| || |||||||||||| Sbjct 28017 CCTCAAGGGTGATGGTCTTCCCGGTGAGAGTTTTCACGAAAATCTGCATT 28066 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || | || || | ||| || ||||||||||| || ||||||||||||| Sbjct 27383 CCTCCACGCAGACGGAGAACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAG 27442 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | ||||| | ||||| || || |||| || |||||||| ||| || Sbjct 27443 AGAGTGCGACCATCCTCGAGCTGTTTACCAGCGAAAATTAGTCGCTGTTGATCCGGTGGG 27502 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | |||||||||||| ||||| ||| || | | | || || || ||| Sbjct 27503 ATGCCCTCTTTGTCTTGAATTTTGGCCTTGACATTTTCGATCGTATCCGAGGCCTCGACC 27562 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 || | |||||||||||| || || || ||||| ||||| || |||||| Sbjct 27563 TCGAGGGTGATGGTTTTACCCGTGAGGGTTTTTACAAAGATTTGCATT 27610 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 |||||||| || | || |||| || || ||||| ||||| || || ||||| || | | Sbjct 26927 CCTCCTCGCAGACGGAGGACCAAGTGGAGGGTGGATTCCTTCTGGATATTGTAATCAGAC 26986 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || ||||||| | ||||| || || | || || ||||| ||||| || Sbjct 26987 AACGTGCGACCGTCCTCGAGCTGTTTACCAGCGAAGATGAGTCGCTGCTGGTCTGGTGGG 27046 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | |||||||||||| || | | |||||| | | | ||||| || ||| Sbjct 27047 ATGCCCTCTTTGTCCTGGATCTTCGCCTTCACGTTCTCGATCGTGTCAGAGGCCTCGACC 27106 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 || | |||||||||||| || || || |||||||| || || |||||| Sbjct 27107 TCAAGGGTGATGGTTTTACCCGTGAGGGTTTTGACGAAGATTTGCATT 27154 >seq1005 Length=228466 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || | || || | |||||| || |||||||| || ||||||||||| | | Sbjct 171739 CCTCCACGCAGACGCAAGACTAAATGCAGGGTCGACTCCTTCTGAATGTTGTAGTCAGAC 171680 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | | ||||||| ||||| |||||| | || | ||||| ||||| ||| Sbjct 171679 AGGGTGCGGCCATCCTCCAGCTGTTTACCCGCAAAGATCAATCGCTGCTGGTCTGGAGGA 171620 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | ||||| ||||| |||| ||| || | | | ||||||| || ||| Sbjct 171619 ATTCCCTCCTTGTCCTGGATTTTGGCCTTGACGTTTTCAATAGTGTCGGAGGCCTCGACC 171560 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | ||||| ||||| || ||||| ||||||||||| |||||||| Sbjct 171559 TCGAGAGTGATTGTTTTACCAGTCAGAGTTTTGACAAAGATCTGCAT 171513 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || | || |||| |||||| || |||||||| || ||||||||||| | | Sbjct 172195 CCTCCACGCAGACGCAAGACCAAATGCAGGGTCGACTCCTTCTGAATGTTGTAGTCAGAC 172136 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | | || || | |||||| |||||| | || | ||||| ||||| || Sbjct 172135 AGGGTGCGGCCATCTTCGAGTTGTTTACCCGCAAAGATCAATCGCTGCTGGTCTGGTGGG 172076 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | ||||| ||||| |||| ||| || | | | ||||||| || ||| Sbjct 172075 ATTCCCTCCTTGTCCTGGATTTTGGCCTTGACGTTTTCAATAGTGTCGGAGGCCTCGACC 172016 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | || || ||||| || ||||| ||||||||||| |||||||| Sbjct 172015 TCGAGAGTAATTGTTTTACCAGTCAGAGTTTTGACAAAGATCTGCAT 171969 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || | || || | ||| ||||| |||||||| || ||||||||||||| | Sbjct 171967 CCTCCACGCAGACGAAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAC 171908 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| ||||||| | || || || || |||| | ||||||||||| || Sbjct 171907 AGGGTGCGCCCGTCCTCGAGCTGCTTTCCAGCGAAAATCAATCGCTGTTGGTCTGGGGGA 171848 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | ||||| ||||| ||||| ||| || | | | ||||| | ||| | Sbjct 171847 ATTCCCTCCTTGTCCTGAATTTTAGCCTTGACGTTCTCAATGCTGTCGGAAGCCTCAACT 171788 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| |||||||||||||| || || || ||||| ||||| ||||| Sbjct 171787 TCCAACGTGATGGTTTTTCCAGTGAGGGTCTTGACGAAAATTTGCAT 171741 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || | ||| || | ||| || || |||||||| || ||||||||||||| | Sbjct 171511 CCTCCACGCAGACGCAGGACGAGATGGAGTGTCGACTCCTTCTGGATGTTGTAGTCGGAC 171452 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | ||||| | || || || || |||| | ||||| ||||| || Sbjct 171451 AGGGTACGCCCATCCTCGAGCTGCTTTCCGGCGAAAATCAATCGCTGCTGGTCTGGGGGA 171392 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | |||||| ||||| ||||| ||| || | | | ||||| | ||| | Sbjct 171391 ATGCCCTCCTTGTCCTGAATTTTAGCCTTGACGTTCTCAATGCTGTCGGAAGCCTCAACT 171332 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939 |||| ||| ||||| || || || || ||||| ||||| |||||||| ||| Sbjct 171331 TCCAAGGTAATGGTCTTACCAGTTAGTGTTTTAACAAAGATCTGCATGTTG 171281 Score = 86.0 bits (94), Expect = 5e-12 Identities = 149/215 (69%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| ||| || || |||||||| || ||||||||||| | || || | | || Sbjct 172408 AGGACCAAATGAAGGGTCGACTCCTTCTGAATGTTGTAGTCAGACAGAGTGCGGCCATCT 172349 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 || | |||||| |||||| | || | ||||| ||||| || | |||||| ||||| Sbjct 172348 TCGAGTTGTTTACCCGCAAAGATCAATCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCC 172289 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || || ||| || | | | |||| || ||| ||||| ||| |||| Sbjct 172288 TGGATCTTAGC--CTTGACGTTCTCGATGCTGTCAGAGGCCTCAACTTCCAAGGTAATGG 172231 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 | || || |||| ||||| |||||||| |||||| Sbjct 172230 TCTTGCCAGTCAATGTTTTAACAAAAATTTGCATT 172196 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405028479407440