Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrocentrus_20cingulum_20[genbank_20GCA_5F002156465.1_202017-05-22] 12,056 sequences; 127,916,415 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq3539 205 6e-48 seq10480 131 1e-25 seq8320 131 1e-25 seq9099 122 6e-23 seq6112 122 6e-23 seq11508 113 3e-20 seq177 109 4e-19 seq4421 100 2e-16 seq1005 89.7 3e-13 >seq3539 Length=271623 Score = 205 bits (226), Expect = 6e-48 Identities = 314/446 (70%), Gaps = 4/446 (1%) Strand=Plus/Plus Query 6158 CACGATGGGGACCCTGAACGTAAATCGTAATGTGGCGGACGCGTTCTACCGCTACAAAAT 6217 ||||||||| | | || |||||||| |||| || || || || || |||||||| Sbjct 168238 CACGATGGGCAGTGTAAATGTAAATCGCGGTGTGAGCGATGCATTTTATCGTTACAAAAT 168297 Query 6218 GCCGCGCATCTGCGCCAAGGTCGAGGGTAAGGGAAACGGTATTAAAACCGTCATTGTCAA 6277 |||||| || || || || || ||||| || || || |||||||| ||||| || || Sbjct 168298 GCCGCGTATTCAGGCAAAAGTTGAAGGTAAAGGCAATGGAATTAAAACAGTCATCGTAAA 168357 Query 6278 CATGCCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCCACCTACCCGACGAAATATTTCGG 6337 |||| ||||| || || || | || | ||||| || || ||||| |||||||| || Sbjct 168358 CATGGTGGAAGTGGCAAAAGCCATTGGGAGACCTGCTACATATCCGACAAAATATTTTGG 168417 Query 6338 GTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAACGAGCGCTTCATCGTTAACGG 6397 |||||| | || || ||||| || |||||| || |||| | || |||||||| || Sbjct 168418 CTGCGAATTGGGAGCACAGACTCAATTTGATTTTAAGCACGAAAGATTTATCGTTAATGG 168477 Query 6398 ATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGACGGCTTTATTCGCAAGTTTGTGCT 6457 |||||| | | | ||||| || || || || ||||| ||||| || || | |||| | Sbjct 168478 CTCGCATGAGGCAACTAAGCTTCAAGATTTGCTGGACGGATTTATCCGTAAATATGTGTT 168537 Query 6458 GTGTCGGGAATGCGATAACCCGGAGACCGAGCTTATTGTGTCTACCAAGAGAAACACCAT 6517 ||||| | ||||| || ||||| || |||||| | || | || | | || ||| Sbjct 168538 GTGTCCAGCTTGCGACAATCCGGAAACTGAGCTTGTCGTCAGCGCAAAAAAAGGCATCAT 168597 Query 6518 CTCTCAGGGCTGCAAAGCGTGCGGTTACCATGGCAAGCTGGATTTATCA--CACAAACTC 6575 || ||| |||| ||||| ||||| | ||||| || || | || ||||| ||| Sbjct 168598 ATCGCAGAGCTGTAAAGCCTGCGGCCATCATGGTCTACTTGA--GAGCAACCACAAGCTC 168655 Query 6576 AACACCTTCATACTGAAGAATCCTCC 6601 || |||| ||| ||||||| || || Sbjct 168656 AATACCTACATCTTGAAGAACCCGCC 168681 >seq10480 Length=1712 Score = 131 bits (144), Expect = 1e-25 Identities = 75/77 (97%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1173 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGT 1114 Query 20007 GGTAATATTTAGCCTTA 20023 ||| ||||||||||||| Sbjct 1113 GGTTATATTTAGCCTTA 1097 Score = 107 bits (118), Expect = 1e-18 Identities = 61/62 (98%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 62 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGT 3 Query 20007 GG 20008 || Sbjct 2 GG 1 >seq8320 Length=319 Score = 131 bits (144), Expect = 1e-25 Identities = 75/77 (97%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 140 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGT 199 Query 20007 GGTAATATTTAGCCTTA 20023 ||| ||||||||||||| Sbjct 200 GGTTATATTTAGCCTTA 216 >seq9099 Length=95834 Score = 122 bits (134), Expect = 6e-23 Identities = 84/95 (88%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||| |||||||||||||||||||||||||| | ||||||| Sbjct 3241 AAGCCCGTTCCCTTGGCAGTGGTTTCGCTAGATAGTAGATAGGGACAAAAGGGATCTCGT 3300 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| |||||||||||||||||||||||||||| Sbjct 3301 TCATCCATTCATGCGCGTCACTAATTAGATGACGA 3335 Score = 118 bits (130), Expect = 7e-22 Identities = 83/95 (87%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||| |||||||||||||||||||||||||| | ||||||| Sbjct 3585 AAGCCCGTTCCCTTGGCAGTGGTTTCGCTAGATAGTAGATAGGGACAAAAGGGATCTCGT 3644 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| || ||||||||||||||||||||||||| Sbjct 3645 TCATCCATTTATGCGCGTCACTAATTAGATGACGA 3679 Score = 116 bits (128), Expect = 2e-21 Identities = 81/92 (88%), Gaps = 5/92 (5%) Strand=Plus/Plus Query 25905 CCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTAA 25959 |||||||||||||| |||||||||||||||||||||||||| | |||||||| | Sbjct 3349 CCCGTTCCCTTGGCAGTGGTTTCGCTAGATAGTAGATAGGGACAAAAGGGATCTCGTTCA 3408 Query 25960 TCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 ||| |||||||||||||||||||||||||||| Sbjct 3409 TCCATTCATGCGCGTCACTAATTAGATGACGA 3440 >seq6112 Length=5998 Score = 122 bits (134), Expect = 6e-23 Identities = 84/95 (88%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||| |||||||||||||||||||||||||| | ||||||| Sbjct 382 AAGCCCGTTCCCTTGGCAGTGGTTTCGCTAGATAGTAGATAGGGACAAAAGGGATCTCGT 441 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| |||||||||||||||||||||||||||| Sbjct 442 TCATCCATTCATGCGCGTCACTAATTAGATGACGA 476 >seq11508 Length=54009 Score = 113 bits (124), Expect = 3e-20 Identities = 167/233 (72%), Gaps = 3/233 (1%) Strand=Plus/Plus Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145 |||| ||||||| | ||||| ||||||||||| ||| |||||| ||||| ||||| | Sbjct 27835 CATT-CCACCTCGGAGACGCAGAACCAAATGAAGGGTGGACTCCTTCTGAATGTTGTAGT 27893 Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205 | || | | || |||| || | || ||||||||||| || || || |||||||| | Sbjct 27894 CGGAGAGAGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAAGATCAGTCGCTGTTGATCCG 27953 Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCAC-TT 38264 |||| |||||| |||||| || ||| ||| || |||| | || || | || Sbjct 27954 GTGGGATGCCTTCCTTGTCCTGGATCTTTGCCTTGACGTTCTCAATCGTGTC-CGACGCC 28012 Query 38265 TCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || || || | || || || || || || | ||||||||||| |||||||| Sbjct 28013 TCGACCTCAAGGGTGATGGTCTTCCCGGTGAGAGTTTTCACGAAAATCTGCAT 28065 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149 ||| |||| || ||| | ||||| || || ||| ||||| || |||||||||||||| Sbjct 26926 ACCTCCTCGCAGACGGAGGACCAAGTGGAGGGTGGATTCCTTCTGGATATTGTAATCAGA 26985 Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209 ||| || |||| || | ||||| || || || || || || || || || | || Sbjct 26986 CAACGTGCGACCGTCCTCGAGCTGTTTACCAGCGAAGATGAGTCGCTGCTGGTCTGGTGG 27045 Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269 || ||| ||||||||| || || |||||| |||| || || || || || Sbjct 27046 GATGCCCTCTTTGTCCTGGATCTTCGCCTTCACGTTCTCGATCGTGTCAGAGGCCTCGAC 27105 Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || | || || ||||||||||| | |||||| ||||| || ||||| Sbjct 27106 CTCAAGGGTGATGGTTTTACCCGTGAGGGTTTTGACGAAGATTTGCAT 27153 Score = 96.9 bits (106), Expect = 2e-15 Identities = 162/233 (70%), Gaps = 1/233 (0%) Strand=Plus/Plus Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145 |||| ||||||| |||||| | |||| ||| || || ||| ||||| || ||||| | Sbjct 27151 CATT-CCACCTCGCAAACGGAGGACCAGATGGAGGGTCGACTCTTTTTGGATGTTGTAGT 27209 Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205 | |||| | |||| || | || |||||||| || || || || || || || | Sbjct 27210 CCGACAGGGTTCTGCCGTCCTCGAGCTGCTTTCCGGCGAAAATCAGTCGCTGCTGGTCTG 27269 Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265 |||| ||| ||||||||| || || ||| || |||| || || || | Sbjct 27270 GTGGGATGCCCTCTTTGTCCTGGATCTTCGCCTTTACGTTCTCGATCGTGTCAGAGGCCT 27329 Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 |||| || | || || ||||||||||| | |||||| ||||| ||||||||| Sbjct 27330 CAACCTCAAGGGTGATGGTTTTACCCGTGAGGGTTTTGACGAAAATCTGCATG 27382 Score = 89.7 bits (98), Expect = 3e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 || || | || ||| | || | ||| |||||| |||||| || || ||||| || || Sbjct 27383 CCTCCACGCAGACGGAGAACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAG 27442 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | | || | || || | ||||| || || || ||||| || |||||||| | ||| Sbjct 27443 AGAGTGCGACCATCCTCGAGCTGTTTACCAGCGAAAATTAGTCGCTGTTGATCCGGTGGG 27502 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | ||| |||||||| |||||| ||| ||||| | || ||||| || || Sbjct 27503 ATGCCCTCTTTGTCTTGAATTTTGGCCTTGACATTTTCGATCGTATCCGAGGCCTCGACC 27562 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || | || || ||||||||||| | |||||| || || || ||||| Sbjct 27563 TCGAGGGTGATGGTTTTACCCGTGAGGGTTTTTACAAAGATTTGCAT 27609 >seq177 Length=1216 Score = 109 bits (120), Expect = 4e-19 Identities = 77/88 (88%), Gaps = 5/88 (6%) Strand=Plus/Minus Query 25909 TTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGGGTAA-----TCTCGTTAATCCT 25963 |||||||||| |||||||||||||||||||||||||| || ||||||| |||| Sbjct 1216 TTCCCTTGGCAGTGGTTTCGCTAGATAGTAGATAGGGACAAAAGGGATCTCGTTCATCCA 1157 Query 25964 TTCATGCGCGTCACTAATTAGATGACGA 25991 |||||||||||||||||||||||||||| Sbjct 1156 TTCATGCGCGTCACTAATTAGATGACGA 1129 >seq4421 Length=631 Score = 100 bits (110), Expect = 2e-16 Identities = 80/95 (84%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG---GGTAATCTCGTTA 25958 ||||||||||||||||| |||||||||||||||||||||||||| | | | ||| Sbjct 494 AAGCCCGTTCCCTTGGCAGTGGTTTCGCTAGATAGTAGATAGGGACAACGAGTGTGGTTT 553 Query 25959 ATCCTT--TCATGCGCGTCACTAATTAGATGACGA 25991 | | || ||||||||||||||||||||||||||| Sbjct 554 ACCGTTTCTCATGCGCGTCACTAATTAGATGACGA 588 >seq1005 Length=228466 Score = 89.7 bits (98), Expect = 3e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 38109 ACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCT 38168 ||||||||||| || |||||| ||||| ||||| ||||||| | || | || || Sbjct 172405 ACCAAATGAAGGGTCGACTCCTTCTGAATGTTGTAGTCAGACAGAGTGCGGCCATCTTCG 172346 Query 38169 AATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATA 38228 | |||||| || ||||| || | || || || || | ||| | ||| || |||||| Sbjct 172345 AGTTGTTTACCCGCAAAGATCAATCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGG 172286 Query 38229 ATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTA 38288 || || ||| || |||| || | || |||||||| || ||||| || || Sbjct 172285 ATCTTAGCCTTGACGTTCTCGATGCTGTCAGAGGCCTCAACTTCCAAGGTAATGGTCTTG 172226 Query 38289 CCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || ||||| ||||| || || || ||||| Sbjct 172225 CCAGTCAATGTTTTAACAAAAATTTGCAT 172197 Score = 82.4 bits (90), Expect = 5e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 || || | || ||||| || | ||| || || |||||| || || ||||| || ||| Sbjct 171511 CCTCCACGCAGACGCAGGACGAGATGGAGTGTCGACTCCTTCTGGATGTTGTAGTCGGAC 171452 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | ||| | || || | || |||||||| || || | || || || || | ||| Sbjct 171451 AGGGTACGCCCATCCTCGAGCTGCTTTCCGGCGAAAATCAATCGCTGCTGGTCTGGGGGA 171392 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | ||| || |||||| |||||| ||| || |||| | | || | |||||| Sbjct 171391 ATGCCCTCCTTGTCCTGAATTTTAGCCTTGACGTTCTCAATGCTGTCGGAAGCCTCAACT 171332 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320 || || ||||| || ||||| || | ||||| || || ||||||||||| Sbjct 171331 TCCAAGGTAATGGTCTTACCAGTTAGTGTTTTAACAAAGATCTGCATGTT 171282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334897985370536